RNA–Protein interactions for RNA: ENSMUST00000101326.9

Ebf1-202, Transcript of Transcription factor COE1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf1, Length 3,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1-202ENSMUST00000101326 Gtf3c3Q3TMP1 882 aa17.68■□□□□ 0.42
Ebf1-202ENSMUST00000101326 ChgaP26339 463 aaKnown RBP17.66■□□□□ 0.42
Ebf1-202ENSMUST00000101326 Cabp1Q9JLK7 227 aa17.65■□□□□ 0.42
Ebf1-202ENSMUST00000101326 4933416C03RikQ3V063 378 aa17.62■□□□□ 0.41
Ebf1-202ENSMUST00000101326 DaxxO35613 739 aa17.61■□□□□ 0.41
Ebf1-202ENSMUST00000101326 Irx3P81067 507 aa17.61■□□□□ 0.41
Ebf1-202ENSMUST00000101326 Plcd4Q8K3R3 807 aa17.61■□□□□ 0.41
Ebf1-202ENSMUST00000101326 Rgl3Q3UYI5 709 aa17.6■□□□□ 0.41
Ebf1-202ENSMUST00000101326 Iqcf3Q9D498 203 aa17.59■□□□□ 0.41
Ebf1-202ENSMUST00000101326 Unc13aQ4KUS2 1712 aa17.57■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Cux2P70298 1426 aa17.57■□□□□ 0.4
Ebf1-202ENSMUST00000101326 EprsQ8CGC7 1512 aaKnown RBP17.56■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Ccdc9Q8VC31 543 aaKnown RBP17.56■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Ercc6F8VPZ5 1481 aa17.55■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Mug1P28665 1476 aa17.55■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Rprd2Q6NXI6 1469 aaKnown RBP17.54■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Rundc1Q0VDN7 615 aa17.54■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Duox2A2AQ99 1517 aa17.54■□□□□ 0.4
Ebf1-202ENSMUST00000101326 LrpprcQ6PB66 1392 aaKnown RBP17.53■□□□□ 0.4
Ebf1-202ENSMUST00000101326 NeflP08551 543 aa17.53■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Fhod3Q76LL6 1578 aa17.52■□□□□ 0.4
Ebf1-202ENSMUST00000101326 Rad21Q61550 635 aaKnown RBP17.52■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Erbb3Q61526 1339 aa17.51■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Kif27Q7M6Z4 1394 aa17.51■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Rad54l2Q99NG0 1466 aa17.51■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Cwc22Q8C5N3 908 aaKnown RBP17.5■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Zbtb4Q5F293 982 aa17.5■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Ift140E9PY46 1464 aa17.5■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Dapk1Q80YE7 1442 aa17.49■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Grwd1Q810D6 446 aaKnown RBP17.49■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Lmtk2Q3TYD6 1471 aa17.48■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Plekhg5Q66T02 1073 aa17.48■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Card11Q8CIS0 1159 aa17.48■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Ubl4bQ9CQ84 188 aa17.47■□□□□ 0.39
Ebf1-202ENSMUST00000101326 PogzQ8BZH4 1409 aaKnown RBP17.47■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Setbp1Q9Z180 1582 aa17.46■□□□□ 0.39
Ebf1-202ENSMUST00000101326 NexmifQ5DTT1 1515 aa17.46■□□□□ 0.39
Ebf1-202ENSMUST00000101326 SynmQ70IV5 1561 aa17.46■□□□□ 0.39
Ebf1-202ENSMUST00000101326 Disp1Q3TDN0 1521 aa17.46■□□□□ 0.39
Ebf1-202ENSMUST00000101326 B4galnt3Q6L8S8 986 aa17.45■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Dhx9O70133 1380 aaKnown RBP17.44■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Rpgrip1lQ8CG73 1264 aa17.44■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Polr1aO35134 1717 aaKnown RBP17.43■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Samd9lQ69Z37 1561 aa17.43■□□□□ 0.38
Ebf1-202ENSMUST00000101326 CanxP35564 591 aaKnown RBP17.43■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Zfp444Q3TDV8 331 aaKnown RBP17.43■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Anp32bQ9EST5 272 aaKnown RBP17.43■□□□□ 0.38
Ebf1-202ENSMUST00000101326 BC005561E9Q5E2 1589 aa17.41■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Gpatch8A2A6A1 1505 aa17.41■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Abcc5Q9R1X5 1436 aa17.41■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Kank1E9Q238 1360 aa17.4■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Myom3A2ABU4 1439 aa17.4■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Ttll13A4Q9F6 804 aa17.4■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Pik3c2gO70167 1506 aa17.4■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Fgd1P52734 960 aa17.4■□□□□ 0.38
Ebf1-202ENSMUST00000101326 Rfx7F8VPJ6 1459 aa17.39■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Dbr1Q923B1 550 aa17.39■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Prkrip1Q9CWV6 186 aaKnown RBP17.38■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Plekhh2Q8C115 1491 aa17.38■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Q7TT23 1179 aa17.37■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Trak1Q6PD31 939 aa17.37■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Sart3Q9JLI8 962 aaKnown RBP17.36■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Mtus2Q3UHD3 1353 aa17.35■□□□□ 0.37
Ebf1-202ENSMUST00000101326 CadpsQ80TJ1 1355 aa17.35■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Zscan21Q07231 555 aa17.35■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Mak16Q8BGS0 296 aaKnown RBP17.34■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Gcc2Q8CHG3 1679 aa17.33■□□□□ 0.37
Ebf1-202ENSMUST00000101326 Mug2P28666 1451 aa17.33■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Dhx57Q6P5D3 1388 aaKnown RBP17.32■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Naip6Q9JIB6 1403 aa17.31■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Nkx1-2P42580 305 aa17.31■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Ttll5Q8CHB8 1328 aa17.31■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Kif14L0N7N1 1674 aaKnown RBP17.3■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Zbtb7cQ8VCZ7 619 aa17.3■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Phldb1Q6PDH0 1371 aaKnown RBP17.29■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Arhgef40Q3UPH7 1517 aa17.29■□□□□ 0.36
Ebf1-202ENSMUST00000101326 Mink1Q9JM52 1308 aa17.27■□□□□ 0.36
Ebf1-202ENSMUST00000101326 SphkapQ6NSW3 1687 aa17.26■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Apbb1Q9QXJ1 710 aa17.26■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Cdk13Q69ZA1 1511 aaKnown RBP17.26■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Adgrb2Q8CGM1 1561 aa17.26■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Ipo4Q8VI75 1082 aa17.25■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Mbd5B1AYB6 1498 aa17.25■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Kdm6bQ5NCY0 1641 aa17.25■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Dnai1Q8C0M8 701 aa17.24■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Rock2P70336 1388 aa17.24■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Ncoa3O09000 1398 aa17.23■□□□□ 0.35
Ebf1-202ENSMUST00000101326 AlkP97793 1621 aa17.23■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Pla2r1Q62028 1487 aa17.22■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Esx1O88933 382 aa17.22■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Soga1E1U8D0 1418 aa17.22■□□□□ 0.35
Ebf1-202ENSMUST00000101326 CrbnQ8C7D2 445 aa17.21■□□□□ 0.35
Ebf1-202ENSMUST00000101326 ArxO35085 564 aa17.21■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Chmp5Q9D7S9 219 aa17.21■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Abca5Q8K448 1642 aa17.21■□□□□ 0.35
Ebf1-202ENSMUST00000101326 Ak9G3UYQ4 1894 aa17.2■□□□□ 0.34
Ebf1-202ENSMUST00000101326 NudcO35685 332 aaKnown RBP17.19■□□□□ 0.34
Ebf1-202ENSMUST00000101326 EspnQ9ET47 871 aa17.19■□□□□ 0.34
Ebf1-202ENSMUST00000101326 WrnO09053 1401 aa17.18■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Wdr7Q920I9 1489 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms