RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 ArxO35085 564 aa9.32□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Apbb1Q9QXJ1 710 aa9.32□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Plb1Q3TTY0 1478 aa9.32□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Map3k1P53349 1493 aa9.31□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Tiam1Q60610 1591 aa9.31□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Wdr43Q6ZQL4 677 aaKnown RBP9.31□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Plekhh2Q8C115 1491 aa9.31□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Gm13695A2AK44 830 aa9.31□□□□□ -0.92
Col6a6-201ENSMUST00000060896 CadpsQ80TJ1 1355 aa9.3□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Crocc2F6XLV1 1638 aa9.3□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Trim26Q99PN3 545 aa9.3□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Lrriq1Q0P5X1 1673 aa9.3□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Kif21aQ9QXL2 1672 aa9.3□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Nup155Q99P88 1391 aaKnown RBP9.29□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Gm20521D3Z5F7 333 aa9.29□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Gm7298A0A0N4SVU1 1476 aa9.29□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Pcf11G3X9Z4 1553 aa9.29□□□□□ -0.92
Col6a6-201ENSMUST00000060896 EprsQ8CGC7 1512 aaKnown RBP9.28□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Cc2d2bA0A286YDU8 1405 aa9.28□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Jph4Q80WT0 628 aa9.28□□□□□ -0.92
Col6a6-201ENSMUST00000060896 PrkcshO08795 521 aa9.28□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Neurod2Q62414 383 aa9.28□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Fhad1A6PWD2 1420 aa9.27□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Eif4g3Q80XI3 1579 aaKnown RBP9.27□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Cwc22Q8C5N3 908 aaKnown RBP9.27□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Pabpn1Q8CCS6 302 aaKnown RBP9.27□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Kif3bQ61771 747 aa9.26□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Srpk2O54781 681 aaKnown RBP9.25□□□□□ -0.93
Col6a6-201ENSMUST00000060896 UacaQ8CGB3 1411 aa9.25□□□□□ -0.93
Col6a6-201ENSMUST00000060896 3425401B19RikD3Z1D3 1412 aa9.25□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Slx4Q6P1D7 1565 aa9.25□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Arhgap31A6X8Z5 1425 aa9.24□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Kcna4Q61423 654 aa9.24□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Ankrd26Q811D2 1581 aa9.24□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Dhx9O70133 1380 aaKnown RBP9.24□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Vps8Q0P5W1 1427 aa9.22□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Smg6P61406 1418 aaKnown RBP9.22□□□□□ -0.93
Col6a6-201ENSMUST00000060896 A2mQ6GQT1 1474 aa9.21□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Ttll5Q8CHB8 1328 aa9.21□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Stk26Q99JT2 416 aa9.21□□□□□ -0.93
Col6a6-201ENSMUST00000060896 Pbrm1Q8BSQ9 1634 aaKnown RBP9.21□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Setd1bQ8CFT2 1985 aa9.21□□□□□ -0.94
Col6a6-201ENSMUST00000060896 SynmQ70IV5 1561 aa9.2□□□□□ -0.94
Col6a6-201ENSMUST00000060896 4933416C03RikQ3V063 378 aa9.2□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Lemd3Q9WU40 921 aa9.2□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Znf710Q3U288 666 aa9.19□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Stag3O70576 1240 aa9.19□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Shroom2A2ALU4 1481 aa9.19□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Map3k5O35099 1380 aa9.19□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Soga1E1U8D0 1418 aa9.19□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Naip2Q9QUK4 1447 aa9.19□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Fan1Q69ZT1 1020 aa9.19□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Dbr1Q923B1 550 aa9.19□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Slc4a1apE9PX68 744 aa9.18□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Dapk1Q80YE7 1442 aa9.18□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Dhx57Q6P5D3 1388 aaKnown RBP9.18□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Grin2aP35436 1464 aa9.18□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Inpp5dQ9ES52 1191 aa9.18□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Nolc1E9Q5C9 702 aaKnown RBP9.17□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Hdac5Q9Z2V6 1113 aa9.17□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Polr1aO35134 1717 aaKnown RBP9.17□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Ankrd36D3Z4K0 1415 aa9.17□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Senp3Q9EP97 568 aaKnown RBP9.17□□□□□ -0.94
Col6a6-201ENSMUST00000060896 NexmifQ5DTT1 1515 aa9.17□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Pank3Q8R2W9 370 aa9.17□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Exosc9Q9JHI7 438 aaKnown RBP9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Rusc2Q80U22 1514 aa9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Gm1043A0A140LJC2 1431 aa9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Spag9Q58A65 1321 aaKnown RBP9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 B4galnt3Q6L8S8 986 aa9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Ppp1r18Q8BQ30 594 aa9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Srcin1Q9QWI6 1250 aa9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Samd9lQ69Z37 1561 aa9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Fgd6Q69ZL1 1399 aa9.16□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Slc4a2P13808 1237 aaKnown RBP9.15□□□□□ -0.94
Col6a6-201ENSMUST00000060896 CrbnQ8C7D2 445 aa9.15□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Gpatch8A2A6A1 1505 aa9.15□□□□□ -0.94
Col6a6-201ENSMUST00000060896 Dcaf11Q91VU6 549 aa9.15□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Abcc5Q9R1X5 1436 aa9.14□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Zscan21Q07231 555 aa9.14□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Safb2Q80YR5 991 aaKnown RBP9.14□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Armcx1Q9CX83 456 aa9.14□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Mug1P28665 1476 aa9.14□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Rock2P70336 1388 aa9.14□□□□□ -0.95
Col6a6-201ENSMUST00000060896 NgefQ8CHT1 710 aa9.14□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Gtf2e1Q9D0D5 440 aa9.14□□□□□ -0.95
Col6a6-201ENSMUST00000060896 DaxxO35613 739 aa9.13□□□□□ -0.95
Col6a6-201ENSMUST00000060896 PxdnQ3UQ28 1475 aa9.13□□□□□ -0.95
Col6a6-201ENSMUST00000060896 IqubQ8CDK3 788 aa9.13□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Plin1Q8CGN5 517 aa9.13□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Nup160Q9Z0W3 1402 aaKnown RBP9.12□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Dnajc5P60904 198 aa9.12□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Pde4cQ3UEI1 686 aa9.12□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Znf316Q6PGE4 1016 aa9.12□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Rpgrip1lQ8CG73 1264 aa9.12□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Ncoa3O09000 1398 aa9.12□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Disp1Q3TDN0 1521 aa9.12□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Q7TT23 1179 aa9.12□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Neo1P97798 1493 aa9.11□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Esx1O88933 382 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 80 ms