RNA–Protein interactions for RNA: ENSMUST00000035218.8

Nckipsd-201, Transcript of NCK-interacting protein with SH3 domain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckipsd, Length 3,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckipsd-201ENSMUST00000035218 Gtf3c3Q3TMP1 882 aa17.79■□□□□ 0.44
Nckipsd-201ENSMUST00000035218 Mapk8ip2Q9ERE9 830 aa17.78■□□□□ 0.44
Nckipsd-201ENSMUST00000035218 Erich6D3Z6S9 713 aa17.77■□□□□ 0.44
Nckipsd-201ENSMUST00000035218 Pcdh10E9PXQ7 1057 aa17.76■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Gtf3c5Q8R2T8 520 aa17.76■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Dnajc5gQ8C632 165 aa17.76■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Ccdc9Q8VC31 543 aaKnown RBP17.76■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Gm1043A0A140LJC2 1431 aa17.75■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 BccipQ9CWI3 316 aa17.75■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Sart1Q9Z315 806 aaKnown RBP17.73■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Polr1aO35134 1717 aaKnown RBP17.72■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Prex2Q3LAC4 1598 aa17.71■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Tiam1Q60610 1591 aa17.71■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 NexmifQ5DTT1 1515 aa17.71■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 Mug1P28665 1476 aa17.71■□□□□ 0.43
Nckipsd-201ENSMUST00000035218 3425401B19RikD3Z1D3 1412 aa17.7■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 Ccdc141E9Q8Q6 1531 aa17.69■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 Arhgef12Q8R4H2 1543 aaKnown RBP17.69■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 Map3k5O35099 1380 aa17.69■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 Wdr66E9Q743 1299 aa17.68■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 Abca5Q8K448 1642 aa17.67■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 Dnmt1P13864 1620 aaKnown RBP17.66■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 ClspnQ80YR7 1315 aa17.65■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 Plcd4Q8K3R3 807 aa17.65■□□□□ 0.42
Nckipsd-201ENSMUST00000035218 Lmo7E9PYF4 1699 aaKnown RBP17.64■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Magi1Q6RHR9 1471 aa17.62■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Irx3P81067 507 aa17.62■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Trappc8E9PWG2 1437 aa17.61■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Atp10dQ8K2X1 1416 aa17.61■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Arhgef40Q3UPH7 1517 aa17.61■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Hspa5P20029 655 aaKnown RBP17.61■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Mtus2Q3UHD3 1353 aa17.59■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Upf2A2AT37 1269 aaKnown RBP17.59■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Dnajc5P60904 198 aa17.58■□□□□ 0.41
Nckipsd-201ENSMUST00000035218 Mroh2aD3Z750 1679 aa17.58■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 NclP09405 707 aaKnown RBP17.57■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Cep170Q6A065 1588 aa17.57■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Pbrm1Q8BSQ9 1634 aaKnown RBP17.57■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 SafbD3YXK2 937 aaKnown RBP17.57■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Zcchc11B2RX14 1644 aaKnown RBP17.56■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Rapgef6Q5NCJ1 1609 aa17.55■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Slc24a1Q91WD8 1130 aa17.55■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Map3k4O08648 1597 aa17.55■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Erich3F6QRE9 1637 aa17.54■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Kif3bQ61771 747 aa17.54■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Trak1Q6PD31 939 aa17.54■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 MlecQ6ZQI3 291 aaKnown RBP17.54■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Adgrl3Q80TS3 1537 aa17.53■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Ipo4Q8VI75 1082 aa17.53■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Chd1P40201 1711 aa17.53■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 A2mQ6GQT1 1474 aa17.53■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Lemd3Q9WU40 921 aa17.53■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 Arhgap5P97393 1501 aa17.52■□□□□ 0.4
Nckipsd-201ENSMUST00000035218 MyclP10166 368 aa17.51■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Kdm6bQ5NCY0 1641 aa17.5■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Gm13697A2AK42 830 aa17.49■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Fam163aQ8CAA5 168 aa17.48■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Ncoa2Q61026 1462 aa17.48■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Rgl3Q3UYI5 709 aa17.48■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Znf316Q6PGE4 1016 aa17.47■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Abcc5Q9R1X5 1436 aa17.47■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Grwd1Q810D6 446 aaKnown RBP17.46■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Col17a1Q07563 1470 aa17.46■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Aebp2Q9Z248 504 aaKnown RBP17.46■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Arhgef11Q68FM7 1552 aa17.46■□□□□ 0.39
Nckipsd-201ENSMUST00000035218 Ncapd3Q6ZQK0 1506 aa17.45■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Depdc5P61460 1591 aa17.45■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Fancd2Q80V62 1450 aa17.43■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Stk24Q99KH8 431 aa17.43■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Map4P27546 1125 aaKnown RBP17.43■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Prdm10Q3UTQ7 1184 aa17.42■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 TonslQ6NZL6 1363 aa17.42■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Plekhh2Q8C115 1491 aa17.41■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Safb2Q80YR5 991 aaKnown RBP17.41■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Lrrc9Q8CDN9 1456 aa17.41■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Adgrb2Q8CGM1 1561 aa17.4■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Mphosph9A6H5Y1 991 aa17.4■□□□□ 0.38
Nckipsd-201ENSMUST00000035218 Ccdc27Q3V036 639 aa17.39■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 P3h3Q8CG70 732 aa17.39■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Adcy10Q8C0T9 1614 aa17.39■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Wdr7Q920I9 1489 aa17.39■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Atp1b4Q99ME6 356 aa17.37■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Afap1Q80YS6 731 aa17.37■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Pkd2O35245 966 aa17.36■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Dhx57Q6P5D3 1388 aaKnown RBP17.36■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Ptch1Q61115 1434 aa17.35■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Ttll5Q8CHB8 1328 aa17.35■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Igf1rQ60751 1373 aa17.35■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Os9Q8K2C7 672 aa17.34■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 AI481877A2ALV5 1481 aa17.34■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Kdm2aP59997 1161 aa17.34■□□□□ 0.37
Nckipsd-201ENSMUST00000035218 Sall3Q62255 1320 aa17.33■□□□□ 0.36
Nckipsd-201ENSMUST00000035218 Ak9G3UYQ4 1894 aa17.32■□□□□ 0.36
Nckipsd-201ENSMUST00000035218 Dhx9O70133 1380 aaKnown RBP17.32■□□□□ 0.36
Nckipsd-201ENSMUST00000035218 Sin3aQ60520 1274 aaKnown RBP17.31■□□□□ 0.36
Nckipsd-201ENSMUST00000035218 Kdm5bQ80Y84 1544 aa17.31■□□□□ 0.36
Nckipsd-201ENSMUST00000035218 Zfp777B9EKF4 885 aa17.31■□□□□ 0.36
Nckipsd-201ENSMUST00000035218 Spag9Q58A65 1321 aaKnown RBP17.3■□□□□ 0.36
Nckipsd-201ENSMUST00000035218 Naip2Q9QUK4 1447 aa17.3■□□□□ 0.36
Nckipsd-201ENSMUST00000035218 Mlh3A0A1Y7VMP7 1443 aa17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms