RNA–Protein interactions for RNA: ENSMUST00000025989.8

Tm9sf3-201, Transcript of Transmembrane 9 superfamily member 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tm9sf3, Length 6,144 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf3-201ENSMUST00000025989 Atad2bE9Q166 1460 aaKnown RBP25.95■■□□□ 1.74
Tm9sf3-201ENSMUST00000025989 Sart1Q9Z315 806 aaKnown RBP25.94■■□□□ 1.74
Tm9sf3-201ENSMUST00000025989 CntlnA2AM05 1397 aa25.93■■□□□ 1.74
Tm9sf3-201ENSMUST00000025989 Dhx57Q6P5D3 1388 aaKnown RBP25.93■■□□□ 1.74
Tm9sf3-201ENSMUST00000025989 Dbr1Q923B1 550 aa25.89■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Chmp4bQ9D8B3 224 aaKnown RBP25.88■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Nup155Q99P88 1391 aaKnown RBP25.88■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 HdgfP51859 237 aaKnown RBP25.88■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Sin3aQ60520 1274 aaKnown RBP25.87■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Carmil1Q6EDY6 1374 aa25.85■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Tmf1B9EKI3 1091 aa25.85■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Pes1Q9EQ61 584 aaKnown RBP25.85■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 LrpprcQ6PB66 1392 aaKnown RBP25.85■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 U2af1Q9D883 239 aaKnown RBP25.85■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Dcaf11Q91VU6 549 aa25.84■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Tnnt1O88346 262 aa25.84■■□□□ 1.73
Tm9sf3-201ENSMUST00000025989 Arhgap35Q91YM2 1499 aa25.81■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Dhx29Q6PGC1 1365 aaKnown RBP25.81■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Hsp90b1P08113 802 aaKnown RBP25.8■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Speer4f1Q9D5Q6 258 aa25.8■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Rsph4aQ8BYM7 716 aa25.79■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Fan1Q69ZT1 1020 aa25.77■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Eif4g2Q62448 906 aaKnown RBP25.77■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Senp3Q9EP97 568 aaKnown RBP25.77■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Utp14aQ640M1 767 aaKnown RBP25.77■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Srcin1Q9QWI6 1250 aa25.77■■□□□ 1.72
Tm9sf3-201ENSMUST00000025989 Plekhh2Q8C115 1491 aa25.76■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 CatipB9EKE5 520 aa25.76■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Q3TQI7 289 aaKnown RBP25.74■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Rock2P70336 1388 aa25.73■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Map7O88735 730 aa25.72■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 B4galnt3Q6L8S8 986 aa25.72■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Synj1Q8CHC4 1574 aa25.72■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Tmco5bQ80X59 307 aa25.72■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Ccnb3Q810T2 1396 aa25.71■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Rwdd1Q9CQK7 243 aa25.71■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Sh3bp5Q9Z131 463 aa25.71■■□□□ 1.71
Tm9sf3-201ENSMUST00000025989 Soga1E1U8D0 1418 aa25.7■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Crybg2B7ZCC2 1516 aa25.69■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 WrnO09053 1401 aa25.69■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Ubap1lG3UW59 384 aa25.68■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Exoc6Q8R313 802 aa25.68■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Ap3b2Q9JME5 1082 aa25.68■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Plcb2A3KGF7 1181 aa25.68■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Rapgef2Q8CHG7 1496 aa25.68■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Smarca4Q3TKT4 1613 aaKnown RBP25.68■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Nol10Q5RJG1 687 aaKnown RBP25.65■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 Pak3Q61036 559 aa25.64■■□□□ 1.7
Tm9sf3-201ENSMUST00000025989 PtmaP26350 111 aa25.64■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 PnnO35691 725 aaKnown RBP25.63■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Golga2Q921M4 999 aa25.63■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Pibf1E9Q6K3 756 aa25.62■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Slc4a1apE9PX68 744 aa25.61■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Jph4Q80WT0 628 aa25.6■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Rassf8Q8CJ96 419 aa25.6■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Zscan21Q07231 555 aa25.6■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 HnrnpuQ8VEK3 800 aaKnown RBP25.6■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Trim44Q9QXA7 346 aa25.59■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Spag9Q58A65 1321 aaKnown RBP25.59■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Znf330Q922H9 316 aa25.58■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 CenpjQ569L8 1344 aa25.58■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Shq1Q7TMX5 569 aa25.58■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 Sart3Q9JLI8 962 aaKnown RBP25.58■■□□□ 1.69
Tm9sf3-201ENSMUST00000025989 KnstrnQ9D9Z1 312 aaKnown RBP25.55■■□□□ 1.68
Tm9sf3-201ENSMUST00000025989 Lmod3E9QA62 571 aa25.55■■□□□ 1.68
Tm9sf3-201ENSMUST00000025989 Cabp4Q8VHC5 271 aa25.54■■□□□ 1.68
Tm9sf3-201ENSMUST00000025989 Slc4a3P16283 1227 aa25.52■■□□□ 1.68
Tm9sf3-201ENSMUST00000025989 Bcl11bQ99PV8 884 aa25.52■■□□□ 1.68
Tm9sf3-201ENSMUST00000025989 Smarca2Q6DIC0 1577 aa25.5■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Shroom4Q1W617 1475 aa25.49■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Ppm1fQ8CGA0 452 aa25.49■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Mak16Q8BGS0 296 aaKnown RBP25.49■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 MccE9PWI3 1003 aa25.48■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Ppm1gQ61074 542 aa25.48■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Tdrd9Q14BI7 1383 aa25.47■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Stard8Q8K031 1019 aa25.46■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Chmp3Q9CQ10 224 aa25.46■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 CrbnQ8C7D2 445 aa25.46■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Cluap1Q8R3P7 413 aa25.46■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 ScribQ80U72 1612 aa25.46■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Cc2d2bA0A286YDU8 1405 aa25.45■■□□□ 1.67
Tm9sf3-201ENSMUST00000025989 Pip4k2bQ80XI4 416 aa25.45■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Mink1Q9JM52 1308 aa25.45■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Mbd3Q9Z2D8 285 aaKnown RBP25.44■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Htatsf1Q8BGC0 757 aa25.43■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Ciz1Q8VEH2 845 aa25.43■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Ksr2Q3UVC0 959 aa25.43■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Usp40Q8BWR4 1235 aa25.42■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Iqgap2Q3UQ44 1575 aa25.41■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Anapc15P60007 132 aa25.41■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 Casc1Q6TDU8 730 aa25.39■■□□□ 1.66
Tm9sf3-201ENSMUST00000025989 UacaQ8CGB3 1411 aa25.39■■□□□ 1.65
Tm9sf3-201ENSMUST00000025989 Tsen2Q6P7W5 460 aa25.38■■□□□ 1.65
Tm9sf3-201ENSMUST00000025989 Cttnbp2B9EJA2 1648 aa25.38■■□□□ 1.65
Tm9sf3-201ENSMUST00000025989 Pank3Q8R2W9 370 aa25.37■■□□□ 1.65
Tm9sf3-201ENSMUST00000025989 Chmp5Q9D7S9 219 aa25.37■■□□□ 1.65
Tm9sf3-201ENSMUST00000025989 Usp47Q8BY87 1376 aa25.37■■□□□ 1.65
Tm9sf3-201ENSMUST00000025989 Stk31Q99MW1 1018 aa25.36■■□□□ 1.65
Tm9sf3-201ENSMUST00000025989 MecomP14404 1042 aa25.35■■□□□ 1.65
Tm9sf3-201ENSMUST00000025989 Fam71e1A1L3C1 212 aa25.34■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms