RNA–Protein interactions for RNA: ENSMUST00000024627.13

Chd1-202, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd1, Length 7,916 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-202ENSMUST00000024627 Chmp4bQ9D8B3 224 aaKnown RBP17.44■□□□□ 0.38
Chd1-202ENSMUST00000024627 Ncbp3Q8BZR9 615 aaKnown RBP17.44■□□□□ 0.38
Chd1-202ENSMUST00000024627 Iffo2Q8R2V2 512 aa17.44■□□□□ 0.38
Chd1-202ENSMUST00000024627 Q3TQI7 289 aaKnown RBP17.43■□□□□ 0.38
Chd1-202ENSMUST00000024627 Chmp3Q9CQ10 224 aa17.43■□□□□ 0.38
Chd1-202ENSMUST00000024627 MecomP14404 1042 aa17.43■□□□□ 0.38
Chd1-202ENSMUST00000024627 Pibf1E9Q6K3 756 aa17.43■□□□□ 0.38
Chd1-202ENSMUST00000024627 Tomm22Q9CPQ3 142 aa17.42■□□□□ 0.38
Chd1-202ENSMUST00000024627 Ccdc18Q640L5 1455 aa17.41■□□□□ 0.38
Chd1-202ENSMUST00000024627 KnstrnQ9D9Z1 312 aaKnown RBP17.41■□□□□ 0.38
Chd1-202ENSMUST00000024627 CrebrfQ8CDG5 640 aaKnown RBP17.39■□□□□ 0.37
Chd1-202ENSMUST00000024627 Txndc2Q6P902 515 aa17.39■□□□□ 0.37
Chd1-202ENSMUST00000024627 Ppm1gQ61074 542 aa17.39■□□□□ 0.37
Chd1-202ENSMUST00000024627 Cwc22Q8C5N3 908 aaKnown RBP17.38■□□□□ 0.37
Chd1-202ENSMUST00000024627 Dnai2A2AC93 623 aa17.37■□□□□ 0.37
Chd1-202ENSMUST00000024627 Ercc6F8VPZ5 1481 aa17.37■□□□□ 0.37
Chd1-202ENSMUST00000024627 Tpm3-rs7D3Z2H9 248 aa17.37■□□□□ 0.37
Chd1-202ENSMUST00000024627 Brpf1B2RRD7 1212 aa17.36■□□□□ 0.37
Chd1-202ENSMUST00000024627 Abcc8B2RUS7 1588 aa17.35■□□□□ 0.37
Chd1-202ENSMUST00000024627 Arid4aF8VPQ2 1261 aaKnown RBP17.35■□□□□ 0.37
Chd1-202ENSMUST00000024627 Rwdd1Q9CQK7 243 aa17.35■□□□□ 0.37
Chd1-202ENSMUST00000024627 Zfp777B9EKF4 885 aa17.34■□□□□ 0.37
Chd1-202ENSMUST00000024627 Ccdc9Q8VC31 543 aaKnown RBP17.34■□□□□ 0.37
Chd1-202ENSMUST00000024627 AknaQ80VW7 1404 aa17.34■□□□□ 0.37
Chd1-202ENSMUST00000024627 Ifit1bl1D3Z6F0 470 aa17.34■□□□□ 0.37
Chd1-202ENSMUST00000024627 Pak3Q61036 559 aa17.33■□□□□ 0.37
Chd1-202ENSMUST00000024627 Speer4f1Q9D5Q6 258 aa17.33■□□□□ 0.37
Chd1-202ENSMUST00000024627 Cluap1Q8R3P7 413 aa17.32■□□□□ 0.36
Chd1-202ENSMUST00000024627 Dnttip2Q8R2M2 758 aaKnown RBP17.32■□□□□ 0.36
Chd1-202ENSMUST00000024627 Gpatch11Q3UFS4 262 aa17.32■□□□□ 0.36
Chd1-202ENSMUST00000024627 Sart3Q9JLI8 962 aaKnown RBP17.31■□□□□ 0.36
Chd1-202ENSMUST00000024627 Eea1Q8BL66 1411 aa17.31■□□□□ 0.36
Chd1-202ENSMUST00000024627 Gm973E9Q295 1059 aa17.31■□□□□ 0.36
Chd1-202ENSMUST00000024627 BccipQ9CWI3 316 aa17.31■□□□□ 0.36
Chd1-202ENSMUST00000024627 Ccdc27Q3V036 639 aa17.3■□□□□ 0.36
Chd1-202ENSMUST00000024627 U2af1Q9D883 239 aaKnown RBP17.3■□□□□ 0.36
Chd1-202ENSMUST00000024627 HdgfP51859 237 aaKnown RBP17.3■□□□□ 0.36
Chd1-202ENSMUST00000024627 GorabQ8BRM2 368 aa17.3■□□□□ 0.36
Chd1-202ENSMUST00000024627 Rsf1E9PWW9 1441 aaKnown RBP17.28■□□□□ 0.36
Chd1-202ENSMUST00000024627 HnrnpuQ8VEK3 800 aaKnown RBP17.28■□□□□ 0.36
Chd1-202ENSMUST00000024627 Paf1Q8K2T8 535 aa17.26■□□□□ 0.35
Chd1-202ENSMUST00000024627 Fhad1A6PWD2 1420 aa17.26■□□□□ 0.35
Chd1-202ENSMUST00000024627 Spag9Q58A65 1321 aaKnown RBP17.26■□□□□ 0.35
Chd1-202ENSMUST00000024627 Rundc1Q0VDN7 615 aa17.25■□□□□ 0.35
Chd1-202ENSMUST00000024627 Tnnt2P50752 301 aa17.25■□□□□ 0.35
Chd1-202ENSMUST00000024627 Gtf2e1Q9D0D5 440 aa17.23■□□□□ 0.35
Chd1-202ENSMUST00000024627 SafbD3YXK2 937 aaKnown RBP17.23■□□□□ 0.35
Chd1-202ENSMUST00000024627 Kri1Q8VDQ9 704 aaKnown RBP17.23■□□□□ 0.35
Chd1-202ENSMUST00000024627 Tpd52l1O54818 204 aa17.22■□□□□ 0.35
Chd1-202ENSMUST00000024627 Calcoco2A2A6M5 331 aa17.22■□□□□ 0.35
Chd1-202ENSMUST00000024627 Mfap1aC0HKD8 439 aaKnown RBP17.21■□□□□ 0.35
Chd1-202ENSMUST00000024627 Mfap1bC0HKD9 439 aaKnown RBP17.21■□□□□ 0.35
Chd1-202ENSMUST00000024627 Dcaf11Q91VU6 549 aa17.21■□□□□ 0.35
Chd1-202ENSMUST00000024627 Tmf1B9EKI3 1091 aa17.2■□□□□ 0.34
Chd1-202ENSMUST00000024627 Hspa5P20029 655 aaKnown RBP17.2■□□□□ 0.34
Chd1-202ENSMUST00000024627 Slc4a10Q5DTL9 1118 aa17.19■□□□□ 0.34
Chd1-202ENSMUST00000024627 Krt82Q99M74 516 aa17.18■□□□□ 0.34
Chd1-202ENSMUST00000024627 Cald1E9QA15 768 aaKnown RBP17.18■□□□□ 0.34
Chd1-202ENSMUST00000024627 AppP12023 770 aa17.18■□□□□ 0.34
Chd1-202ENSMUST00000024627 Ripply1Q2WG77 201 aa17.18■□□□□ 0.34
Chd1-202ENSMUST00000024627 Map4P27546 1125 aaKnown RBP17.18■□□□□ 0.34
Chd1-202ENSMUST00000024627 Chmp5Q9D7S9 219 aa17.18■□□□□ 0.34
Chd1-202ENSMUST00000024627 Fam193aQ8CGI1 1231 aaKnown RBP17.16■□□□□ 0.34
Chd1-202ENSMUST00000024627 SetQ9EQU5 289 aaKnown RBP17.16■□□□□ 0.34
Chd1-202ENSMUST00000024627 Golga2Q921M4 999 aa17.16■□□□□ 0.34
Chd1-202ENSMUST00000024627 Ccer1Q9CQL2 403 aa17.16■□□□□ 0.34
Chd1-202ENSMUST00000024627 R3hcc1Q8BSI6 488 aa17.15■□□□□ 0.34
Chd1-202ENSMUST00000024627 Bcl11bQ99PV8 884 aa17.15■□□□□ 0.34
Chd1-202ENSMUST00000024627 Samd1D3YXK1 519 aa17.15■□□□□ 0.34
Chd1-202ENSMUST00000024627 MsnP26041 577 aaKnown RBP17.15■□□□□ 0.34
Chd1-202ENSMUST00000024627 Hdgfl1Q2VPR5 283 aa17.15■□□□□ 0.34
Chd1-202ENSMUST00000024627 Pde3bQ61409 1100 aa17.14■□□□□ 0.33
Chd1-202ENSMUST00000024627 Ap3b2Q9JME5 1082 aa17.14■□□□□ 0.33
Chd1-202ENSMUST00000024627 Ksr2Q3UVC0 959 aa17.13■□□□□ 0.33
Chd1-202ENSMUST00000024627 Ftsj3Q9DBE9 838 aaKnown RBP17.13■□□□□ 0.33
Chd1-202ENSMUST00000024627 Fnbp4Q6ZQ03 1031 aa17.12■□□□□ 0.33
Chd1-202ENSMUST00000024627 Dhx16G3X8X0 1044 aaKnown RBP17.11■□□□□ 0.33
Chd1-202ENSMUST00000024627 1700123L14RikQ3V2K7 440 aa17.11■□□□□ 0.33
Chd1-202ENSMUST00000024627 Supt16hQ920B9 1047 aa17.11■□□□□ 0.33
Chd1-202ENSMUST00000024627 CrbnQ8C7D2 445 aa17.1■□□□□ 0.33
Chd1-202ENSMUST00000024627 Ccar1Q8CH18 1146 aaKnown RBP17.1■□□□□ 0.33
Chd1-202ENSMUST00000024627 Kiaa0754Q69ZZ9 979 aa17.1■□□□□ 0.33
Chd1-202ENSMUST00000024627 Trak1Q6PD31 939 aa17.1■□□□□ 0.33
Chd1-202ENSMUST00000024627 Wdr78E9PYY5 807 aa17.1■□□□□ 0.33
Chd1-202ENSMUST00000024627 AcrbpQ3V140 540 aa17.1■□□□□ 0.33
Chd1-202ENSMUST00000024627 Znf704Q9ERQ3 566 aa17.09■□□□□ 0.33
Chd1-202ENSMUST00000024627 Rpap1Q80TE0 1409 aa17.09■□□□□ 0.33
Chd1-202ENSMUST00000024627 RdxP26043 583 aaKnown RBP17.09■□□□□ 0.33
Chd1-202ENSMUST00000024627 Gm21969J3QJZ1 289 aa17.08■□□□□ 0.32
Chd1-202ENSMUST00000024627 Cc2d1aQ8K1A6 943 aa17.07■□□□□ 0.32
Chd1-202ENSMUST00000024627 Pkd2O35245 966 aa17.07■□□□□ 0.32
Chd1-202ENSMUST00000024627 Tpm3P21107 285 aaKnown RBP17.07■□□□□ 0.32
Chd1-202ENSMUST00000024627 EspnQ9ET47 871 aa17.07■□□□□ 0.32
Chd1-202ENSMUST00000024627 Tcerg1Q8CGF7 1100 aaKnown RBP17.07■□□□□ 0.32
Chd1-202ENSMUST00000024627 Cabp4Q8VHC5 271 aa17.07■□□□□ 0.32
Chd1-202ENSMUST00000024627 Taok2Q6ZQ29 1240 aa17.06■□□□□ 0.32
Chd1-202ENSMUST00000024627 Dnai1Q8C0M8 701 aa17.06■□□□□ 0.32
Chd1-202ENSMUST00000024627 Lemd3Q9WU40 921 aa17.06■□□□□ 0.32
Chd1-202ENSMUST00000024627 Ccdc47Q9D024 483 aaKnown RBP17.06■□□□□ 0.32
Chd1-202ENSMUST00000024627 Mbd3Q9Z2D8 285 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms