RNA–Protein interactions for RNA: ENSMUST00000020034.5

Echdc1-201, Transcript of Ethylmalonyl-CoA decarboxylase, mousemouse

TSL 1 (best) BASIC

Gene Echdc1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1-201ENSMUST00000020034 Prdm10Q3UTQ7 1184 aa13.83□□□□□ -0.2
Echdc1-201ENSMUST00000020034 Naip5Q9R016 1403 aa13.83□□□□□ -0.2
Echdc1-201ENSMUST00000020034 A2mQ6GQT1 1474 aa13.82□□□□□ -0.2
Echdc1-201ENSMUST00000020034 Kcnh8P59111 1102 aa13.82□□□□□ -0.2
Echdc1-201ENSMUST00000020034 Erich6D3Z6S9 713 aa13.81□□□□□ -0.2
Echdc1-201ENSMUST00000020034 PnisrA2AJT4 805 aaKnown RBP13.81□□□□□ -0.2
Echdc1-201ENSMUST00000020034 Upf2A2AT37 1269 aaKnown RBP13.79□□□□□ -0.2
Echdc1-201ENSMUST00000020034 PogzQ8BZH4 1409 aaKnown RBP13.78□□□□□ -0.2
Echdc1-201ENSMUST00000020034 PrkcshO08795 521 aa13.78□□□□□ -0.2
Echdc1-201ENSMUST00000020034 Hsp90aa1P07901 733 aaKnown RBP13.76□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Gm1043A0A140LJC2 1431 aa13.75□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Map4P27546 1125 aaKnown RBP13.75□□□□□ -0.21
Echdc1-201ENSMUST00000020034 B4galnt3Q6L8S8 986 aa13.75□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Ipo9Q91YE6 1041 aa13.75□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Apbb1Q9QXJ1 710 aa13.75□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Plekhh2Q8C115 1491 aa13.75□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Dbr1Q923B1 550 aa13.74□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Dapk1Q80YE7 1442 aa13.74□□□□□ -0.21
Echdc1-201ENSMUST00000020034 ArxO35085 564 aa13.73□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Ncoa2Q61026 1462 aa13.73□□□□□ -0.21
Echdc1-201ENSMUST00000020034 CanxP35564 591 aaKnown RBP13.73□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Zscan21Q07231 555 aa13.73□□□□□ -0.21
Echdc1-201ENSMUST00000020034 ChgaP26339 463 aaKnown RBP13.72□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Liat1Q810M6 228 aa13.72□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Rrp7aQ9D1C9 280 aaKnown RBP13.72□□□□□ -0.21
Echdc1-201ENSMUST00000020034 WrnO09053 1401 aa13.71□□□□□ -0.21
Echdc1-201ENSMUST00000020034 Ift140E9PY46 1464 aa13.71□□□□□ -0.21
Echdc1-201ENSMUST00000020034 L3mbtl2P59178 703 aa13.71□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Nlrp6Q91WS2 869 aa13.71□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Urb2E9Q7L1 1524 aaKnown RBP13.7□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Dhx9O70133 1380 aaKnown RBP13.7□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Mak16Q8BGS0 296 aaKnown RBP13.7□□□□□ -0.22
Echdc1-201ENSMUST00000020034 CadpsQ80TJ1 1355 aa13.69□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Rpgrip1lQ8CG73 1264 aa13.69□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Ncoa1P70365 1447 aa13.69□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Kdm2aP59997 1161 aa13.68□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Clstn2Q9ER65 966 aa13.68□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Nup155Q99P88 1391 aaKnown RBP13.67□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Polr3glQ8R0C0 218 aa13.66□□□□□ -0.22
Echdc1-201ENSMUST00000020034 EprsQ8CGC7 1512 aaKnown RBP13.66□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Neurod2Q62414 383 aa13.65□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Ttll5Q8CHB8 1328 aa13.65□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Erich3F6QRE9 1637 aa13.65□□□□□ -0.22
Echdc1-201ENSMUST00000020034 Mroh3A0A1D5RM54 893 aa13.65□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Ifit1bl1D3Z6F0 470 aa13.65□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Plekhg5Q66T02 1073 aa13.64□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Q7TT23 1179 aa13.64□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Polr1aO35134 1717 aaKnown RBP13.63□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Camsap2Q8C1B1 1461 aa13.63□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Abcc5Q9R1X5 1436 aa13.62□□□□□ -0.23
Echdc1-201ENSMUST00000020034 CrbnQ8C7D2 445 aa13.62□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Tdrd9Q14BI7 1383 aa13.61□□□□□ -0.23
Echdc1-201ENSMUST00000020034 SynmQ70IV5 1561 aa13.61□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Pank3Q8R2W9 370 aa13.61□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Trim30dE9PWL0 497 aa13.61□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Zfp444Q3TDV8 331 aaKnown RBP13.61□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Ccdc9Q8VC31 543 aaKnown RBP13.61□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Inpp5dQ9ES52 1191 aa13.61□□□□□ -0.23
Echdc1-201ENSMUST00000020034 NexmifQ5DTT1 1515 aa13.6□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Esx1O88933 382 aa13.6□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Rprd2Q6NXI6 1469 aaKnown RBP13.59□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Egfem1Q8C088 590 aa13.59□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Chmp5Q9D7S9 219 aa13.59□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Crocc2F6XLV1 1638 aa13.58□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Gpatch8A2A6A1 1505 aa13.58□□□□□ -0.23
Echdc1-201ENSMUST00000020034 Cc2d2bA0A286YDU8 1405 aa13.58□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Lmo7E9PYF4 1699 aaKnown RBP13.58□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Mug1P28665 1476 aa13.58□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Rwdd1Q9CQK7 243 aa13.57□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Hdac5Q9Z2V6 1113 aa13.57□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Rangap1P46061 589 aaKnown RBP13.56□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Irx3P81067 507 aa13.56□□□□□ -0.24
Echdc1-201ENSMUST00000020034 4930567H17RikQ3V0K5 233 aa13.55□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Trim26Q99PN3 545 aa13.55□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Speer4f1Q9D5Q6 258 aa13.54□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Ttll13A4Q9F6 804 aa13.54□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Slc4a1apE9PX68 744 aa13.54□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Rock2P70336 1388 aa13.53□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Hsp90ab1P11499 724 aaKnown RBP13.53□□□□□ -0.24
Echdc1-201ENSMUST00000020034 Samd9lQ69Z37 1561 aa13.52□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Tmf1B9EKI3 1091 aa13.52□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Prkrip1Q9CWV6 186 aaKnown RBP13.52□□□□□ -0.25
Echdc1-201ENSMUST00000020034 EspnQ9ET47 871 aa13.51□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Thoc2B1AZI6 1594 aaKnown RBP13.51□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Gm20521D3Z5F7 333 aa13.51□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Il16O54824 1322 aa13.51□□□□□ -0.25
Echdc1-201ENSMUST00000020034 BC005561E9Q5E2 1589 aa13.51□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Armcx1Q9CX83 456 aa13.51□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Dennd4bQ3U1Y4 1499 aa13.5□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Ncoa3O09000 1398 aa13.5□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Rfx7F8VPJ6 1459 aa13.5□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Dnai1Q8C0M8 701 aa13.5□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Sart1Q9Z315 806 aaKnown RBP13.5□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Cnga1P29974 684 aa13.49□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Ppm1gQ61074 542 aa13.49□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Zscan10Q3URR7 782 aa13.49□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Iqcf3Q9D498 203 aa13.49□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Gtf3c3Q3TMP1 882 aa13.48□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Sart3Q9JLI8 962 aaKnown RBP13.48□□□□□ -0.25
Echdc1-201ENSMUST00000020034 Srcin1Q9QWI6 1250 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms