RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W PUP3P25451 205 aaKnown RBP5.79□□□□□ -1.48
ATG4YNL223W ATP7P30902 174 aa5.79□□□□□ -1.48
ATG4YNL223W RPF2P36160 344 aaKnown RBP5.79□□□□□ -1.48
ATG4YNL223W SPF1P39986 1215 aaKnown RBP5.79□□□□□ -1.48
ATG4YNL223W YIL001WP40560 513 aa5.79□□□□□ -1.48
ATG4YNL223W NUP85P46673 744 aa5.79□□□□□ -1.48
ATG4YNL223W FMP33P46998 180 aa5.79□□□□□ -1.48
ATG4YNL223W NOP9P47077 666 aaKnown RBP5.79□□□□□ -1.48
ATG4YNL223W YGL108CP53139 140 aa5.79□□□□□ -1.48
ATG4YNL223W NPY1P53164 384 aa5.79□□□□□ -1.48
ATG4YNL223W YGR015CP53208 328 aa5.79□□□□□ -1.48
ATG4YNL223W YGR016WP53209 190 aa5.79□□□□□ -1.48
ATG4YNL223W SDH1Q00711 640 aa5.79□□□□□ -1.48
ATG4YNL223W ECM9Q02202 377 aa5.79□□□□□ -1.48
ATG4YNL223W ECM11Q04110 302 aa5.79□□□□□ -1.48
ATG4YNL223W EMI1Q04406 187 aa5.79□□□□□ -1.48
ATG4YNL223W SPC2Q04969 178 aa5.79□□□□□ -1.48
ATG4YNL223W ATG10Q07879 167 aa5.79□□□□□ -1.48
ATG4YNL223W NSE1Q07913 336 aa5.79□□□□□ -1.48
ATG4YNL223W MUM3Q08750 479 aa5.79□□□□□ -1.48
ATG4YNL223W RRP42Q12277 265 aaPredicted RBP5.79□□□□□ -1.48
ATG4YNL223W MHT1Q12525 324 aa5.79□□□□□ -1.48
ATG4YNL223W DST1P07273 309 aa5.78□□□□□ -1.48
ATG4YNL223W TUB1P09733 447 aaKnown RBP5.78□□□□□ -1.48
ATG4YNL223W FUS1P11710 512 aa5.78□□□□□ -1.48
ATG4YNL223W CLN2P20438 545 aa5.78□□□□□ -1.48
ATG4YNL223W BUD14P27637 709 aa5.78□□□□□ -1.48
ATG4YNL223W AST1P35183 429 aa5.78□□□□□ -1.48
ATG4YNL223W ROT2P38138 954 aa5.78□□□□□ -1.48
ATG4YNL223W GIP1P38229 639 aa5.78□□□□□ -1.48
ATG4YNL223W BMT2P38278 337 aa5.78□□□□□ -1.48
ATG4YNL223W TAE1P38340 232 aa5.78□□□□□ -1.48
ATG4YNL223W YHR078WP38799 552 aa5.78□□□□□ -1.48
ATG4YNL223W GDH3P39708 457 aa5.78□□□□□ -1.48
ATG4YNL223W LSM5P40089 93 aaKnown RBP5.78□□□□□ -1.48
ATG4YNL223W YFR018CP43599 363 aa5.78□□□□□ -1.48
ATG4YNL223W GTO1P48239 356 aa5.78□□□□□ -1.48
ATG4YNL223W NBP35P52920 328 aa5.78□□□□□ -1.48
ATG4YNL223W MPS2P53159 387 aa5.78□□□□□ -1.48
ATG4YNL223W GET1P53192 235 aa5.78□□□□□ -1.48
ATG4YNL223W ZRG17P53735 605 aa5.78□□□□□ -1.48
ATG4YNL223W YNR061CP53747 219 aa5.78□□□□□ -1.48
ATG4YNL223W AQR1P53943 586 aa5.78□□□□□ -1.48
ATG4YNL223W MPS1P54199 764 aa5.78□□□□□ -1.48
ATG4YNL223W TGL2P54857 326 aa5.78□□□□□ -1.48
ATG4YNL223W AAT1Q01802 451 aa5.78□□□□□ -1.48
ATG4YNL223W RPM2Q02773 1202 aa5.78□□□□□ -1.48
ATG4YNL223W NAN1Q02931 896 aaKnown RBP5.78□□□□□ -1.48
ATG4YNL223W VHS1Q03785 461 aa5.78□□□□□ -1.48
ATG4YNL223W GRS2Q06817 618 aa5.78□□□□□ -1.48
ATG4YNL223W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
ATG4YNL223W RAD59Q12223 238 aa5.78□□□□□ -1.48
ATG4YNL223W RUP1Q12242 671 aa5.78□□□□□ -1.48
ATG4YNL223W CET1O13297 549 aaPredicted RBP5.77□□□□□ -1.49
ATG4YNL223W AI3P03877 415 aa5.77□□□□□ -1.49
ATG4YNL223W YKR104WP0CE69 306 aa5.77□□□□□ -1.49
ATG4YNL223W RPS4AP0CX35 261 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W RPS4BP0CX36 261 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W MSS116P15424 664 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W UGA1P17649 471 aa5.77□□□□□ -1.49
ATG4YNL223W FUN30P31380 1131 aa5.77□□□□□ -1.49
ATG4YNL223W MRPL17P36528 281 aa5.77□□□□□ -1.49
ATG4YNL223W YEL073CP39974 107 aa5.77□□□□□ -1.49
ATG4YNL223W AYR1P40471 297 aa5.77□□□□□ -1.49
ATG4YNL223W MEP2P41948 499 aa5.77□□□□□ -1.49
ATG4YNL223W LSB3P43603 459 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W YJR149WP47177 404 aa5.77□□□□□ -1.49
ATG4YNL223W MDM34P53083 459 aa5.77□□□□□ -1.49
ATG4YNL223W YNL260CP53846 198 aa5.77□□□□□ -1.49
ATG4YNL223W MMT1Q03218 510 aa5.77□□□□□ -1.49
ATG4YNL223W YPR084WQ06821 456 aa5.77□□□□□ -1.49
ATG4YNL223W TRM8Q12009 286 aa5.77□□□□□ -1.49
ATG4YNL223W YPL245WQ12179 454 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W YCL012CQ8J0M4 134 aa5.77□□□□□ -1.49
ATG4YNL223W Q0182Q9ZZW1 134 aa5.77□□□□□ -1.49
ATG4YNL223W RPS9AO13516 197 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W ARG81P05085 880 aa5.77□□□□□ -1.49
ATG4YNL223W ARG3P05150 338 aa5.77□□□□□ -1.49
ATG4YNL223W PRT1P06103 763 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W MSS18P08593 268 aa5.77□□□□□ -1.49
ATG4YNL223W MRP13P12686 339 aa5.77□□□□□ -1.49
ATG4YNL223W GCD2P12754 651 aaPredicted RBP5.77□□□□□ -1.49
ATG4YNL223W TOP3P13099 656 aa5.77□□□□□ -1.49
ATG4YNL223W NGG1P32494 702 aa5.77□□□□□ -1.49
ATG4YNL223W TDP1P38319 544 aa5.77□□□□□ -1.49
ATG4YNL223W YHR127WP38833 243 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W FAD1P38913 306 aa5.77□□□□□ -1.49
ATG4YNL223W CCT6P39079 546 aa5.77□□□□□ -1.49
ATG4YNL223W ECM10P39987 644 aa5.77□□□□□ -1.49
ATG4YNL223W PFA3P42836 336 aa5.77□□□□□ -1.49
ATG4YNL223W YJR030CP47101 745 aa5.77□□□□□ -1.49
ATG4YNL223W NUP42P49686 430 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W GPI1P53306 609 aa5.77□□□□□ -1.49
ATG4YNL223W YNL033WP53964 284 aa5.77□□□□□ -1.49
ATG4YNL223W YNL019CP53975 284 aa5.77□□□□□ -1.49
ATG4YNL223W CLU1Q03690 1277 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W ARG7Q04728 441 aa5.77□□□□□ -1.49
ATG4YNL223W YHC1Q05900 231 aaKnown RBP5.77□□□□□ -1.49
ATG4YNL223W YPR109WQ06104 294 aa5.77□□□□□ -1.49
ATG4YNL223W GMC2Q06201 188 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms