RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ERCC3P19447 782 aa20■□□□□ 0.79
PHGDH-230ENST00000641927 MAP2K2P36507 400 aa20■□□□□ 0.79
PHGDH-230ENST00000641927 CCNA1P78396 465 aa20■□□□□ 0.79
PHGDH-230ENST00000641927 CHST13Q8NET6 341 aa20■□□□□ 0.79
PHGDH-230ENST00000641927 TNPO1Q92973 898 aaKnown RBP20■□□□□ 0.79
PHGDH-230ENST00000641927 PGBD1Q96JS3 809 aa20■□□□□ 0.79
PHGDH-230ENST00000641927 SPDYE3A6NKU9 549 aa19.99■□□□□ 0.79
PHGDH-230ENST00000641927 COPB2P35606 906 aa19.99■□□□□ 0.79
PHGDH-230ENST00000641927 CRHR2Q13324 411 aa19.99■□□□□ 0.79
PHGDH-230ENST00000641927 NOM1Q5C9Z4 860 aaKnown RBP19.99■□□□□ 0.79
PHGDH-230ENST00000641927 RNF207Q6ZRF8 634 aa19.99■□□□□ 0.79
PHGDH-230ENST00000641927 FCHSD1Q86WN1 690 aa19.99■□□□□ 0.79
PHGDH-230ENST00000641927 MORF4L1Q9UBU8 362 aa19.99■□□□□ 0.79
PHGDH-230ENST00000641927 FBXO40Q9UH90 709 aa19.99■□□□□ 0.79
PHGDH-230ENST00000641927 FAM205CA6NFA0 338 aa19.98■□□□□ 0.79
PHGDH-230ENST00000641927 M0R2N6 131 aa19.98■□□□□ 0.79
PHGDH-230ENST00000641927 PIK3CDO00329 1044 aa19.98■□□□□ 0.79
PHGDH-230ENST00000641927 TLR2O60603 784 aa19.98■□□□□ 0.79
PHGDH-230ENST00000641927 FAM110CQ1W6H9 321 aa19.98■□□□□ 0.79
PHGDH-230ENST00000641927 KRT25Q7Z3Z0 450 aa19.98■□□□□ 0.79
PHGDH-230ENST00000641927 TNFRSF25Q93038 417 aa19.98■□□□□ 0.79
PHGDH-230ENST00000641927 CA12O43570 354 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 CLK2P49760 499 aaKnown RBP19.97■□□□□ 0.79
PHGDH-230ENST00000641927 EARS2Q5JPH6 523 aaKnown RBP19.97■□□□□ 0.79
PHGDH-230ENST00000641927 ANKRD35Q8N283 1001 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 PORCNQ9H237 461 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 ATP2B1P20020 1258 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 RPS6P62753 249 aaKnown RBP19.97■□□□□ 0.79
PHGDH-230ENST00000641927 AP3B2Q13367 1082 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 NONOQ15233 471 aaKnown RBP eCLIP19.97■□□□□ 0.79
PHGDH-230ENST00000641927 MYSM1Q5VVJ2 828 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 SLC30A10Q6XR72 485 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 MROH8Q9H579 483 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 EFCC1Q9HA90 598 aa19.97■□□□□ 0.79
PHGDH-230ENST00000641927 A1CFQ9NQ94 594 aaKnown RBP19.97■□□□□ 0.79
PHGDH-230ENST00000641927 ADGRA2Q96PE1 1338 aa19.96■□□□□ 0.79
PHGDH-230ENST00000641927 ECM2O94769 699 aaPredicted RBP19.96■□□□□ 0.79
PHGDH-230ENST00000641927 NCLP19338 710 aaKnown RBP19.96■□□□□ 0.79
PHGDH-230ENST00000641927 HSD17B4P51659 736 aa19.96■□□□□ 0.79
PHGDH-230ENST00000641927 BAATQ14032 418 aaPredicted RBP19.96■□□□□ 0.79
PHGDH-230ENST00000641927 INF2Q27J81 1249 aa19.96■□□□□ 0.79
PHGDH-230ENST00000641927 MCTP2Q6DN12 878 aa19.96■□□□□ 0.79
PHGDH-230ENST00000641927 SHCBP1Q8NEM2 672 aa19.96■□□□□ 0.79
PHGDH-230ENST00000641927 CHAMP1Q96JM3 812 aa19.96■□□□□ 0.79
PHGDH-230ENST00000641927 ANO3Q9BYT9 981 aa19.96■□□□□ 0.79
PHGDH-230ENST00000641927 R3HDMLQ9H3Y0 253 aa19.96■□□□□ 0.79
PHGDH-230ENST00000641927 NOL7Q9UMY1 257 aaKnown RBP19.96■□□□□ 0.79
PHGDH-230ENST00000641927 FOSP01100 380 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-230ENST00000641927 DNM1Q05193 864 aaKnown RBP19.95■□□□□ 0.78
PHGDH-230ENST00000641927 KCTD2Q14681 263 aa19.95■□□□□ 0.78
PHGDH-230ENST00000641927 TEX2Q8IWB9 1127 aa19.95■□□□□ 0.78
PHGDH-230ENST00000641927 MAP3K20Q9NYL2 800 aaKnown RBP19.95■□□□□ 0.78
PHGDH-230ENST00000641927 CYP39A1Q9NYL5 469 aa19.95■□□□□ 0.78
PHGDH-230ENST00000641927 RBBP6Q7Z6E9 1792 aaKnown RBP19.95■□□□□ 0.78
PHGDH-230ENST00000641927 BCRP11274 1271 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 CEBPZQ03701 1054 aaKnown RBP19.94■□□□□ 0.78
PHGDH-230ENST00000641927 RILPL1Q5EBL4 403 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 C17orf99Q6UX52 265 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 SAMD3Q8N6K7 520 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 SYTL5Q8TDW5 730 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-230ENST00000641927 TBCKQ8TEA7 893 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 ZNF396Q96N95 335 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-230ENST00000641927 MMP19Q99542 508 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 COL20A1Q9P218 1284 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 PFASO15067 1338 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 TRPA1O75762 1119 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 FCER1AP12319 257 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 GHRHRQ02643 423 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 EHMT1Q9H9B1 1298 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 TFIP11Q9UBB9 837 aaKnown RBP19.94■□□□□ 0.78
PHGDH-230ENST00000641927 IVNS1ABPQ9Y6Y0 642 aa19.94■□□□□ 0.78
PHGDH-230ENST00000641927 TBC1D8O95759 1140 aa19.93■□□□□ 0.78
PHGDH-230ENST00000641927 NBR1Q14596 966 aa19.93■□□□□ 0.78
PHGDH-230ENST00000641927 PURBQ96QR8 312 aaKnown RBP19.93■□□□□ 0.78
PHGDH-230ENST00000641927 RNF186Q9NXI6 227 aa19.93■□□□□ 0.78
PHGDH-230ENST00000641927 MAPK4P31152 587 aa19.92■□□□□ 0.78
PHGDH-230ENST00000641927 TOB1P50616 345 aaPredicted RBP19.92■□□□□ 0.78
PHGDH-230ENST00000641927 UBXN2AP68543 259 aa19.92■□□□□ 0.78
PHGDH-230ENST00000641927 LETM2Q2VYF4 491 aa19.92■□□□□ 0.78
PHGDH-230ENST00000641927 NEK8Q86SG6 692 aa19.92■□□□□ 0.78
PHGDH-230ENST00000641927 TAAR1Q96RJ0 339 aa19.92■□□□□ 0.78
PHGDH-230ENST00000641927 FTOQ9C0B1 505 aaKnown RBP eCLIP19.92■□□□□ 0.78
PHGDH-230ENST00000641927 KRT85P78386 507 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 RMDN3Q96TC7 470 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 MAF1Q9H063 256 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 CFAP45Q9UL16 551 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 PCNTO95613 3336 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 POTEB2H3BUK9 544 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 BAG4O95429 457 aaKnown RBP19.91■□□□□ 0.78
PHGDH-230ENST00000641927 TRAPPC10P48553 1259 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 TTC38Q5R3I4 469 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 ARHGEF16Q5VV41 709 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 GPR142Q7Z601 462 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 GBP4Q96PP9 640 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 USP28Q96RU2 1077 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 CNPY2Q9Y2B0 182 aa19.91■□□□□ 0.78
PHGDH-230ENST00000641927 CCNT1O60563 726 aaKnown RBP19.9■□□□□ 0.78
PHGDH-230ENST00000641927 PGK2P07205 417 aa19.9■□□□□ 0.78
PHGDH-230ENST00000641927 EIF2AK2P19525 551 aaKnown RBP19.9■□□□□ 0.78
PHGDH-230ENST00000641927 SREBF1P36956 1147 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms