RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TRIM47Q96LD4 638 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 PNMA5Q96PV4 448 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 C7orf25Q9BPX7 421 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 IDI2Q9BXS1 227 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 MRPL44Q9H9J2 332 aaKnown RBP19.05■□□□□ 0.64
PHGDH-229ENST00000641891 A0A0U1RQJ8 604 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 GDF11O95390 407 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 FXR2P51116 673 aaKnown RBP eCLIP19.04■□□□□ 0.641e-6■■■■□ 19.3
PHGDH-229ENST00000641891 STK4Q13043 487 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 SEPT2Q15019 361 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 TTI2Q6NXR4 508 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 ATRIPQ8WXE1 791 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 CUL5Q93034 780 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 CALML4Q96GE6 196 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 NUDT12Q9BQG2 462 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 SRRTQ9BXP5 876 aaKnown RBP19.04■□□□□ 0.64
PHGDH-229ENST00000641891 BLOC1S4Q9NUP1 217 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 EXOC1Q9NV70 894 aa19.04■□□□□ 0.64
PHGDH-229ENST00000641891 PSMA7O14818 248 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 TUBB4AP04350 444 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 STIM1Q13586 685 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 MCM6Q14566 821 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 SIAH1Q8IUQ4 282 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 ANKRD20A12PQ8NF67 263 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 UIMC1Q96RL1 719 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 WDR24Q96S15 920 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 DUSP9Q99956 384 aaKnown RBP19.03■□□□□ 0.64
PHGDH-229ENST00000641891 DHX36Q9H2U1 1008 aaKnown RBP19.03■□□□□ 0.64
PHGDH-229ENST00000641891 TDRD3Q9H7E2 651 aaKnown RBP19.03■□□□□ 0.64
PHGDH-229ENST00000641891 PI4KBQ9UBF8 816 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 FKBP1AP62942 108 aaKnown RBP19.03■□□□□ 0.64
PHGDH-229ENST00000641891 UBXN1Q04323 297 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 ELF2Q15723 593 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 QRICH1Q2TAL8 776 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 MRIQ9BWK5 157 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 PSTPIP2Q9H939 334 aa19.03■□□□□ 0.64
PHGDH-229ENST00000641891 SLC1A4P43007 532 aa19.02■□□□□ 0.64
PHGDH-229ENST00000641891 SNAP25P60880 206 aa19.02■□□□□ 0.64
PHGDH-229ENST00000641891 TMEM266Q2M3C6 531 aa19.02■□□□□ 0.64
PHGDH-229ENST00000641891 SLFN13Q68D06 897 aa19.02■□□□□ 0.64
PHGDH-229ENST00000641891 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.02■□□□□ 0.641e-6■□□□□ 10.9
PHGDH-229ENST00000641891 MYH7BA7E2Y1 1941 aa19.02■□□□□ 0.64
PHGDH-229ENST00000641891 USP17L15C9J2P7 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L13C9JLJ4 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L11C9JVI0 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L18D6R9N7 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L22D6RA61 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L17D6RBQ6 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L19D6RCP7 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L20D6RJB6 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 GNG11P61952 73 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 JAG1P78504 1218 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L24Q0WX57 530 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 USP17L6PQ6QN14 398 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 CNGA4Q8IV77 575 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 C7orf43Q8WVR3 580 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 NUP88Q99567 741 aaPredicted RBP19.02■□□□□ 0.63
PHGDH-229ENST00000641891 CCDC94Q9BW85 323 aaPredicted RBP19.02■□□□□ 0.63
PHGDH-229ENST00000641891 TRIM34Q9BYJ4 488 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 THAP9Q9H5L6 903 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 DDX25Q9UHL0 483 aaKnown RBP19.02■□□□□ 0.63
PHGDH-229ENST00000641891 SERPINA10Q9UK55 444 aa19.02■□□□□ 0.63
PHGDH-229ENST00000641891 MYMKA6NI61 221 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 URI1O94763 535 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-229ENST00000641891 HDLBPQ00341 1268 aaKnown RBP19.01■□□□□ 0.63
PHGDH-229ENST00000641891 ANKRD40Q6AI12 368 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 TATDN1Q6P1N9 297 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 KCNK18Q7Z418 384 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 KIAA0895Q8NCT3 520 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 SNX29Q8TEQ0 813 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 HAS1Q92839 578 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 MKL1Q969V6 931 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 KANSL2Q9H9L4 492 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 NYAP2Q9P242 653 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 ADGRG1Q9Y653 693 aa19.01■□□□□ 0.63
PHGDH-229ENST00000641891 YDJCA8MPS7 323 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 PES1O00541 588 aaKnown RBP19■□□□□ 0.63
PHGDH-229ENST00000641891 MRPL12P52815 198 aaKnown RBP19■□□□□ 0.63
PHGDH-229ENST00000641891 ERVK-24P63145 666 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 ICA1Q05084 483 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 CDC37Q16543 378 aaPredicted RBP19■□□□□ 0.63
PHGDH-229ENST00000641891 ECM1Q16610 540 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 SV2BQ7L1I2 683 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 CSGALNACT2Q8N6G5 542 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 P2RX5Q93086 422 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 CNKSR1Q969H4 720 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 DHTKD1Q96HY7 919 aaPredicted RBP19■□□□□ 0.63
PHGDH-229ENST00000641891 CDK5RAP3Q96JB5 506 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 NAA15Q9BXJ9 866 aaKnown RBP19■□□□□ 0.63
PHGDH-229ENST00000641891 IRX2Q9BZI1 471 aaPredicted RBP19■□□□□ 0.63
PHGDH-229ENST00000641891 SLC39A2Q9NP94 309 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 ABHD10Q9NUJ1 306 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 GOLGA6L9A6NEM1 432 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 LGALS16A8MUM7 142 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 TPM1P09493 284 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 CCDC175P0C221 793 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 AMPD3Q01432 767 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 PPP4R3AQ6IN85 833 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 DYMQ7RTS9 669 aa19■□□□□ 0.63
PHGDH-229ENST00000641891 DCAF4Q8WV16 495 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms