RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 CCDC144BQ3MJ40 725 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 BLOC1S2Q6QNY1 142 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 FANCBQ8NB91 859 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 SPZ1Q9BXG8 430 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 XPNPEP3Q9NQH7 507 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 EPB41L2O43491 1005 aaKnown RBP20.08■□□□□ 0.81
PHGDH-227ENST00000641811 COL6A1P12109 1028 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 CASTP20810 708 aaKnown RBP20.08■□□□□ 0.81
PHGDH-227ENST00000641811 RPS6KB1P23443 525 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 LRRC41Q15345 812 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 SYNE3Q6ZMZ3 975 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 Q6ZUG5 572 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 FBXO16Q8IX29 292 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-227ENST00000641811 CCDC82Q8N4S0 544 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 ARRDC4Q8NCT1 418 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 PDGFCQ9NRA1 345 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 COL20A1Q9P218 1284 aa20.08■□□□□ 0.81
PHGDH-227ENST00000641811 ADD3Q9UEY8 706 aaKnown RBP20.08■□□□□ 0.81
PHGDH-227ENST00000641811 KLF18A0A0U1RQI7 1052 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 hCG_1642624A0A1W2PR95 340 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 CFBP00751 764 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 GNAQP50148 359 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 IRX5P78411 483 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-227ENST00000641811 FGD1P98174 961 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 MCF2L2Q86YR7 1114 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 SYTL5Q8TDW5 730 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-227ENST00000641811 MORC4Q8TE76 937 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 TAAR1Q96RJ0 339 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 LZTS2Q9BRK4 669 aa20.07■□□□□ 0.8
PHGDH-227ENST00000641811 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-227ENST00000641811 DNM1LO00429 736 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 ZBTB43O43298 467 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 PTGS1P23219 599 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 PSMA5P28066 241 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 ADCYAP1R1P41586 468 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 APOBRQ0VD83 1088 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 TMEM63BQ5T3F8 832 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 TMTC3Q6ZXV5 915 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 BRF1Q92994 677 aa20.06■□□□□ 0.8
PHGDH-227ENST00000641811 RRP36Q96EU6 259 aaKnown RBP20.06■□□□□ 0.8
PHGDH-227ENST00000641811 SENP6Q9GZR1 1112 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-227ENST00000641811 NAP1L2Q9ULW6 460 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-227ENST00000641811 SYNRGQ9UMZ2 1314 aa20.05■□□□□ 0.8
PHGDH-227ENST00000641811 LRRC37A2A6NM11 1700 aa20.05■□□□□ 0.8
PHGDH-227ENST00000641811 KBTBD13C9JR72 458 aa20.05■□□□□ 0.8
PHGDH-227ENST00000641811 SMARCA1P28370 1054 aa20.05■□□□□ 0.8
PHGDH-227ENST00000641811 HOXA13P31271 388 aaPredicted RBP20.05■□□□□ 0.8
PHGDH-227ENST00000641811 TAPT1Q6NXT6 567 aa20.05■□□□□ 0.8
PHGDH-227ENST00000641811 DNERQ8NFT8 737 aa20.05■□□□□ 0.8
PHGDH-227ENST00000641811 GOLGA8AA7E2F4 631 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 GOLGA8BA8MQT2 603 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 ADAMTS4O75173 837 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 DUSP11O75319 330 aaKnown RBP20.04■□□□□ 0.8
PHGDH-227ENST00000641811 HSD17B4P51659 736 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 TNFAIP2Q03169 654 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 PDE4DQ08499 809 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 RTN1Q16799 776 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 PRPF38BQ5VTL8 546 aaKnown RBP20.04■□□□□ 0.8
PHGDH-227ENST00000641811 FERMT2Q96AC1 680 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 ZSWIM6Q9HCJ5 1215 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 VTA1Q9NP79 307 aa20.04■□□□□ 0.8
PHGDH-227ENST00000641811 MYADML2A6NDP7 307 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 H0YGN5 161 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 EVI5O60447 810 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 SEC24BO95487 1268 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 SMPD1P17405 629 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 EDNRBP24530 442 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 ATN1P54259 1190 aaPredicted RBP20.03■□□□□ 0.8
PHGDH-227ENST00000641811 TRAF1Q13077 416 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 LRRC26Q2I0M4 334 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 NOL8Q76FK4 1167 aaKnown RBP20.03■□□□□ 0.8
PHGDH-227ENST00000641811 RUFY3Q7L099 469 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 RMDN3Q96TC7 470 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 UPF3BQ9BZI7 483 aaKnown RBP20.03■□□□□ 0.8
PHGDH-227ENST00000641811 MAF1Q9H063 256 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 FAM217BQ9NTX9 383 aaPredicted RBP20.03■□□□□ 0.8
PHGDH-227ENST00000641811 SEC63Q9UGP8 760 aaKnown RBP20.03■□□□□ 0.8
PHGDH-227ENST00000641811 ALPK3Q96L96 1907 aa20.03■□□□□ 0.8
PHGDH-227ENST00000641811 LOC102724159A0A0B4J2E5 919 aa20.02■□□□□ 0.8
PHGDH-227ENST00000641811 EIF2AK2P19525 551 aaKnown RBP20.02■□□□□ 0.8
PHGDH-227ENST00000641811 CDC27P30260 824 aa20.02■□□□□ 0.8
PHGDH-227ENST00000641811 GHRHRQ02643 423 aa20.02■□□□□ 0.8
PHGDH-227ENST00000641811 PWP2Q15269 919 aaKnown RBP20.02■□□□□ 0.8
PHGDH-227ENST00000641811 RNF180Q86T96 592 aa20.02■□□□□ 0.8
PHGDH-227ENST00000641811 NSUN6Q8TEA1 469 aaKnown RBP20.02■□□□□ 0.8
PHGDH-227ENST00000641811 AGXT2Q9BYV1 514 aa20.02■□□□□ 0.8
PHGDH-227ENST00000641811 RBM28Q9NW13 759 aaKnown RBP20.02■□□□□ 0.8
PHGDH-227ENST00000641811 GCOM1H8Y6P7 765 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-227ENST00000641811 C6orf222P0C671 652 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-227ENST00000641811 POLR2MP0CAP2 368 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 ADD1P35611 737 aaKnown RBP20.01■□□□□ 0.79
PHGDH-227ENST00000641811 FUT2Q10981 343 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 ARHGEF16Q5VV41 709 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 IQSEC1Q6DN90 963 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 C7orf61Q8IZ16 206 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 FBXL16Q8N461 479 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 KLHDC9Q8NEP7 349 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 MPHOSPH6Q99547 160 aaKnown RBP20.01■□□□□ 0.79
PHGDH-227ENST00000641811 TM6SF1Q9BZW5 370 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms