RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 HIPK3Q9H422 1215 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 ARHGEF10LQ9HCE6 1279 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 ZHX1Q9UKY1 873 aaPredicted RBP8.78□□□□□ -1
PHGDH-225ENST00000641720 CNPY2Q9Y2B0 182 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 ZNF292O60281 2723 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 ZNF536O15090 1300 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 RAD50Q92878 1312 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 MPHOSPH10O00566 681 aaKnown RBP8.77□□□□□ -1.01
PHGDH-225ENST00000641720 CDC45O75419 566 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 POLR3DP05423 398 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-225ENST00000641720 COPB2P35606 906 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 CCL23P55773 120 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 CNTN2Q02246 1040 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 GNASQ5JWF2 1037 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 SNRNP48Q6IEG0 339 aaKnown RBP8.77□□□□□ -1.01
PHGDH-225ENST00000641720 TAPT1Q6NXT6 567 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 CCDC174Q6PII3 467 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 ALYREFQ86V81 257 aaKnown RBP8.77□□□□□ -1.01
PHGDH-225ENST00000641720 CCDC144CPQ8IYA2 1237 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 CCDC17Q96LX7 622 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 ESYT1Q9BSJ8 1104 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 SLC38A10Q9HBR0 1119 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 ATP8A2Q9NTI2 1148 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 COG5Q9UP83 839 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 HCN4Q9Y3Q4 1203 aa8.77□□□□□ -1.01
PHGDH-225ENST00000641720 GVINP1Q7Z2Y8 2422 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-225ENST00000641720 SGSM2O43147 1006 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 NDUFB10O96000 172 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 SMPD1P17405 629 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 GNAT2P19087 354 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 RASA1P20936 1047 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 GRB10Q13322 594 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 ITGA7Q13683 1181 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 TCTN1Q2MV58 587 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 CTR9Q6PD62 1173 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 MORC4Q8TE76 937 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 SLF1Q9BQI6 1058 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 SH2D4AQ9H788 454 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 SLC4A7Q9Y6M7 1214 aa8.76□□□□□ -1.01
PHGDH-225ENST00000641720 ZFHX2Q9C0A1 2572 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-225ENST00000641720 PLIN4Q96Q06 1357 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 KAT6AQ92794 2004 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 PLXNA4Q9HCM2 1894 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 LCHNA4D1U4 455 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 PRR33A8MZF0 331 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 USP17L21D6R901 530 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 TLR3O15455 904 aaKnown RBP8.75□□□□□ -1.01
PHGDH-225ENST00000641720 APPP05067 770 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 HSPD1P10809 573 aaKnown RBP8.75□□□□□ -1.01
PHGDH-225ENST00000641720 ATP2A2P16615 1042 aaKnown RBP8.75□□□□□ -1.01
PHGDH-225ENST00000641720 TDO2P48775 406 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 PSMC6P62333 389 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 PTH1RQ03431 593 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 MKRN4PQ13434 485 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-225ENST00000641720 AAK1Q2M2I8 961 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 GIMAP6Q6P9H5 292 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 FAM178BQ8IXR5 827 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 IFNL3Q8IZI9 196 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 MICALL1Q8N3F8 863 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 ANKS1AQ92625 1134 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 SNX27Q96L92 541 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 ALDH8A1Q9H2A2 487 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-225ENST00000641720 KANSL2Q9H9L4 492 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 CERS4Q9HA82 394 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 A1CFQ9NQ94 594 aaKnown RBP8.75□□□□□ -1.01
PHGDH-225ENST00000641720 PDGFCQ9NRA1 345 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 ARPP21Q9UBL0 812 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-225ENST00000641720 MYO10Q9HD67 2058 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 ZMYM6O95789 1325 aa8.75□□□□□ -1.01
PHGDH-225ENST00000641720 PATL2C9JE40 543 aaKnown RBP8.74□□□□□ -1.01
PHGDH-225ENST00000641720 F5H6K3 240 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 CABYRO75952 493 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 MRE11P49959 708 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 NHLH1Q02575 133 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 KLRC3Q07444 240 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 FSCN1Q16658 493 aaKnown RBP8.74□□□□□ -1.01
PHGDH-225ENST00000641720 SBK1Q52WX2 424 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 SAMD1Q6SPF0 538 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-225ENST00000641720 TLK2Q86UE8 772 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 TBC1D10CQ8IV04 446 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-225ENST00000641720 RUFY2Q8WXA3 655 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 LSG1Q9H089 658 aaKnown RBP8.74□□□□□ -1.01
PHGDH-225ENST00000641720 NAPBQ9H115 298 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 RAVER2Q9HCJ3 691 aaKnown RBP8.74□□□□□ -1.01
PHGDH-225ENST00000641720 ALG13Q9NP73 1137 aaKnown RBP8.74□□□□□ -1.01
PHGDH-225ENST00000641720 TRMT13Q9NUP7 481 aaKnown RBP8.74□□□□□ -1.01
PHGDH-225ENST00000641720 NYAP2Q9P242 653 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 TAF6LQ9Y6J9 622 aa8.74□□□□□ -1.01
PHGDH-225ENST00000641720 FRYLO94915 3013 aa8.73□□□□□ -1.01
PHGDH-225ENST00000641720 TTC3P53804 2025 aa8.73□□□□□ -1.01
PHGDH-225ENST00000641720 PTPRZ1P23471 2315 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-225ENST00000641720 POTEB3A0JP26 581 aa8.73□□□□□ -1.01
PHGDH-225ENST00000641720 MINDY4BA8MYZ0 360 aa8.73□□□□□ -1.01
PHGDH-225ENST00000641720 FGAP02671 866 aa8.73□□□□□ -1.01
PHGDH-225ENST00000641720 PFKMP08237 780 aa8.73□□□□□ -1.01
PHGDH-225ENST00000641720 CYP2C9P11712 490 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms