RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PCDHA13Q9Y5I0 950 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 RFX7Q2KHR2 1363 aa15.25■□□□□ 0.03
SCARB2-227ENST00000640957 LGALS16A8MUM7 142 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 NLRP5P59047 1200 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 PPP1R7Q15435 360 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 AP1M1Q9BXS5 423 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 CAPN11Q9UMQ6 739 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 ITIH6Q6UXX5 1313 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 MYO1EQ12965 1108 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 ADAT2Q7Z6V5 191 aaKnown RBP15.24■□□□□ 0.03
SCARB2-227ENST00000640957 UBLCP1Q8WVY7 318 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-227ENST00000640957 VCPKMTQ9H867 229 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 ARHGAP20Q9P2F6 1191 aa15.24■□□□□ 0.03
SCARB2-227ENST00000640957 FSBPO95073 299 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 MDH1P40925 334 aaKnown RBP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 SLC1A4P43007 532 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 MAGEA1P43355 309 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 BCAMP50895 628 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 CCNHP51946 323 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 CASKIN2Q8WXE0 1202 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 DNAJC7Q99615 494 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 FAM133BQ5BKY9 247 aaKnown RBP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 EXOC1Q9NV70 894 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 TNKSO95271 1327 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 SOS2Q07890 1332 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 EME2A4GXA9 379 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 KIF11P52732 1056 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 SPAG1Q07617 926 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 MAP3K12Q12852 859 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 ZNF658Q5TYW1 1059 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 IQCEQ6IPM2 695 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 FUKQ8N0W3 1084 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 STAMBPL1Q96FJ0 436 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 CNOT6LQ96LI5 555 aaKnown RBP15.23■□□□□ 0.03
SCARB2-227ENST00000640957 SLC39A2Q9NP94 309 aa15.23■□□□□ 0.03
SCARB2-227ENST00000640957 OVOS2A0A0G2JMS6 1433 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 TLDC2A0PJX2 215 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 LRRC10BA6NIK2 292 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 WTIPA6NIX2 430 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-227ENST00000640957 FLT3P36888 993 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 PKN1Q16512 942 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 ANKRD40Q6AI12 368 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 SGMS1Q86VZ5 419 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 ZBTB38Q8NAP3 1195 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-227ENST00000640957 NOVA2Q9UNW9 492 aaKnown RBP15.22■□□□□ 0.03
SCARB2-227ENST00000640957 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 USO1O60763 962 aaKnown RBP15.22■□□□□ 0.03
SCARB2-227ENST00000640957 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-227ENST00000640957 FAM47AQ5JRC9 791 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 PDXDC2PQ6P474 469 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 MICALCLQ6ZW33 695 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 CPLX4Q7Z7G2 160 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 TBC1D1Q86TI0 1168 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-227ENST00000640957 PIK3R5Q8WYR1 880 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 FAXDC2Q96IV6 333 aa15.22■□□□□ 0.03
SCARB2-227ENST00000640957 GCKP35557 465 aa15.21■□□□□ 0.03
SCARB2-227ENST00000640957 CNOT8Q9UFF9 292 aaKnown RBP15.21■□□□□ 0.03
SCARB2-227ENST00000640957 NWD2Q9ULI1 1742 aa15.21■□□□□ 0.03
SCARB2-227ENST00000640957 MST1RQ04912 1400 aa15.21■□□□□ 0.03
SCARB2-227ENST00000640957 GSG1L2A8MUP6 293 aa15.21■□□□□ 0.03
SCARB2-227ENST00000640957 STK4Q13043 487 aa15.21■□□□□ 0.03
SCARB2-227ENST00000640957 PREPLQ4J6C6 727 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-227ENST00000640957 PLCD4Q9BRC7 762 aa15.21■□□□□ 0.03
SCARB2-227ENST00000640957 TLR10Q9BXR5 811 aa15.21■□□□□ 0.03
SCARB2-227ENST00000640957 LRRC53A6NM62 1247 aa15.21■□□□□ 0.02
SCARB2-227ENST00000640957 BUB1BO60566 1050 aaPredicted RBP15.21■□□□□ 0.02
SCARB2-227ENST00000640957 RASSF9O75901 435 aa15.21■□□□□ 0.02
SCARB2-227ENST00000640957 EZRP15311 586 aaKnown RBP15.21■□□□□ 0.02
SCARB2-227ENST00000640957 FECHP22830 423 aa15.21■□□□□ 0.02
SCARB2-227ENST00000640957 EHBP1Q8NDI1 1231 aa15.21■□□□□ 0.02
SCARB2-227ENST00000640957 FAM167BQ9BTA0 163 aa15.21■□□□□ 0.02
SCARB2-227ENST00000640957 CPVLQ9H3G5 476 aa15.21■□□□□ 0.02
SCARB2-227ENST00000640957 LEMD3Q9Y2U8 911 aa15.21■□□□□ 0.02
SCARB2-227ENST00000640957 GOLGA6L10A6NI86 522 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 GTPBP6O43824 516 aaPredicted RBP15.2■□□□□ 0.02
SCARB2-227ENST00000640957 CTSWP56202 376 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 TRIM14Q14142 442 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 LRRC41Q15345 812 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 NLRP10Q86W26 655 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 TRIM58Q8NG06 486 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 KIF9Q9HAQ2 790 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 RAD51CO43502 376 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 PALMO75781 387 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 CYP7A1P22680 504 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 SMTNP53814 917 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 PDE4DQ08499 809 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 IQCKQ8N0W5 287 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 MMGT1Q8N4V1 131 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 LRRC15Q8TF66 581 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 RPGRIP1Q96KN7 1286 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 ATP6V1G3Q96LB4 118 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 PACSIN1Q9BY11 444 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 DPH5Q9H2P9 285 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 HYOU1Q9Y4L1 999 aa15.2■□□□□ 0.02
SCARB2-227ENST00000640957 H7C1D1 291 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms