RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 MLXIPQ9HAP2 919 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 PCDHA4Q9UN74 947 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 SHTN1A0MZ66 631 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 BICDL2A1A5D9 508 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 USO1O60763 962 aaKnown RBP15.24■□□□□ 0.03
PAX6-280ENST00000640872 LCA5LO95447 670 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 LIG3P49916 1009 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 EVX2Q03828 476 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 CHRNDQ07001 517 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 ALS2CLQ60I27 953 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 RASSF8Q8NHQ8 419 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 EEF2KMTQ96G04 330 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 DRC1Q96MC2 740 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 PCMTD1Q96MG8 357 aaPredicted RBP15.24■□□□□ 0.03
PAX6-280ENST00000640872 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
PAX6-280ENST00000640872 IFIH1Q9BYX4 1025 aaKnown RBP15.24■□□□□ 0.03
PAX6-280ENST00000640872 ARHGAP20Q9P2F6 1191 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 PLAGL2Q9UPG8 496 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 PCDHA13Q9Y5I0 950 aa15.24■□□□□ 0.03
PAX6-280ENST00000640872 LAMB1P07942 1786 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 LOC102724428A0A0B4J2F2 783 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 NKRFO15226 690 aaKnown RBP eCLIP15.23■□□□□ 0.03
PAX6-280ENST00000640872 MOCS3O95396 460 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 TCP1P17987 556 aaKnown RBP15.23■□□□□ 0.03
PAX6-280ENST00000640872 IGHMBP2P38935 993 aaKnown RBP15.23■□□□□ 0.03
PAX6-280ENST00000640872 UBA7P41226 1012 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 MTIF2P46199 727 aaKnown RBP15.23■□□□□ 0.03
PAX6-280ENST00000640872 SIK1P57059 783 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 RASGRP4Q8TDF6 673 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 ZNF384Q8TF68 577 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 ARL8AQ96BM9 186 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 IQCDQ96DY2 449 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 PLIN2Q99541 437 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 DEF6Q9H4E7 631 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 SH3GLB2Q9NR46 395 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 STIM2Q9P246 746 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 HYOU1Q9Y4L1 999 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 MYH1P12882 1939 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 COL4A1P02462 1669 aa15.23■□□□□ 0.03
PAX6-280ENST00000640872 USP17L12C9JPN9 530 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 USP17L21D6R901 530 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 SLC7A5Q01650 507 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 SWT1Q5T5J6 900 aaKnown RBP15.22■□□□□ 0.03
PAX6-280ENST00000640872 NFRKBQ6P4R8 1299 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 PTF1AQ7RTS3 328 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 MAGEF1Q9HAY2 307 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 GEMIN8Q9NWZ8 242 aaKnown RBP15.22■□□□□ 0.03
PAX6-280ENST00000640872 FLT1P17948 1338 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 KIF11P52732 1056 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 MRPS25P82663 173 aaKnown RBP15.22■□□□□ 0.03
PAX6-280ENST00000640872 CCDC152Q4G0S7 254 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 FAM47AQ5JRC9 791 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 MCTP2Q6DN12 878 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 GPKOWQ92917 476 aaPredicted RBP eCLIP15.22■□□□□ 0.03
PAX6-280ENST00000640872 CUEDC2Q9H467 287 aa15.22■□□□□ 0.03
PAX6-280ENST00000640872 ATXN2Q99700 1313 aaKnown RBP15.22■□□□□ 0.03
PAX6-280ENST00000640872 STK4Q13043 487 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 TYW1BQ6NUM6 668 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 POTEDQ86YR6 584 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 TRIM9Q9C026 710 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 RABEP2Q9H5N1 569 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 CCDC87Q9NVE4 849 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 SMARCAL1Q9NZC9 954 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 SIK3Q9Y2K2 1263 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 SPATA31A5Q5VU36 1347 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 SPATA31A7Q8IWB4 1347 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 PHLPP1O60346 1717 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 LAMB2P55268 1798 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 A6NNZ2 444 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 EPHB6O15197 1021 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 PDE4DQ08499 809 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 NNTQ13423 1086 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 TUBB8Q3ZCM7 444 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 FKBP15Q5T1M5 1219 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 TTC19Q6DKK2 380 aaPredicted RBP15.21■□□□□ 0.03
PAX6-280ENST00000640872 RCSD1Q6JBY9 416 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 ALS2CR12Q96Q35 445 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 CEP89Q96ST8 783 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 EHD2Q9NZN4 543 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 PCDHA6Q9UN73 950 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 PCDHA8Q9Y5H6 950 aa15.21■□□□□ 0.03
PAX6-280ENST00000640872 SCN7AQ01118 1682 aa15.21■□□□□ 0.02
PAX6-280ENST00000640872 CCDC194A0A1B0GVG4 234 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 HSF2BPO75031 334 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 PLCG1P19174 1290 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 KIF5BP33176 963 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 PRPHP41219 470 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 PPP1R2P41236 205 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 MATR3P43243 847 aaKnown RBP eCLIP15.2■□□□□ 0.02
PAX6-280ENST00000640872 GYG1P46976 350 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 COBLL1Q53SF7 1204 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 C2CD5Q86YS7 1000 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 C7orf25Q9BPX7 421 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 MYH10P35580 1976 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 LAD1O00515 517 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 PJA2O43164 708 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 FCER1AP12319 257 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 CXCR5P32302 372 aa15.2■□□□□ 0.02
PAX6-280ENST00000640872 EIF4A3P38919 411 aaKnown RBP15.2■□□□□ 0.02
PAX6-280ENST00000640872 CCDC178Q5BJE1 867 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms