RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 MKL1Q969V6 931 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 TOX2Q96NM4 488 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 MKNK2Q9HBH9 465 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 SLC38A10Q9HBR0 1119 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 CLIP2Q9UDT6 1046 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 TCHHQ07283 1943 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 KDM4AO75164 1064 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 PRDM1O75626 825 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 ZSCAN22P10073 491 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 CCT2P78371 535 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 HMGN5P82970 282 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 SART3Q15020 963 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 KCNA10Q16322 511 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 FOXD4L5Q5VV16 416 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 LARP1BQ659C4 914 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 CPXCR1Q8N123 301 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 MAFAQ8NHW3 353 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 SMARCC2Q8TAQ2 1214 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 FOXD4L4Q8WXT5 416 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 MYLIPQ8WY64 445 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 ESR2Q92731 530 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 CEP95Q96GE4 821 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 RNPC3Q96LT9 517 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 GPHNQ9NQX3 736 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 MTMR4Q9NYA4 1195 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 TBX21Q9UL17 535 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 FAM184BQ9ULE4 1060 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 KIF3AQ9Y496 699 aa13.77□□□□□ -0.21
ERGIC3-220ENST00000640748 ERICH2A1L162 156 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 MOXD2PA6NHM9 499 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 GOLGA8BA8MQT2 603 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 IFIT3O14879 490 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 CTAGE5O15320 804 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 RAG1P15918 1043 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 CST5P28325 142 aaPredicted RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 LIFRP42702 1097 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 FPGSQ05932 587 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 TMEM67Q5HYA8 995 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 MCTP1Q6DN14 999 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 LRRC47Q8N1G4 583 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 FAM184AQ8NB25 1140 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 NSUN7Q8NE18 718 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 IGDCC4Q8TDY8 1250 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 KIFC2Q96AC6 838 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 DDX11Q96FC9 970 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 KATNBL1Q9H079 304 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 UPF3AQ9H1J1 476 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 INCENPQ9NQS7 918 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 STARD7Q9NQZ5 370 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 ZSWIM5Q9P217 1185 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 SYNPO2Q9UMS6 1093 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 ATP6V1DQ9Y5K8 247 aa13.76□□□□□ -0.21
ERGIC3-220ENST00000640748 PLIN4Q96Q06 1357 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 JAK2O60674 1132 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 ZBED4O75132 1171 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 F13A1P00488 732 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 FGRP09769 529 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 NT5C2P49902 561 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 CDK7P50613 346 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 ACVR2BQ13705 512 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 CCDC144BQ3MJ40 725 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 NFXL1Q6ZNB6 911 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 C16orf59Q7L2K0 433 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 GMCL1P1Q8NEA9 526 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 NUP133Q8WUM0 1156 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 LY9Q9HBG7 655 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 FEM1BQ9UK73 627 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 TTC28Q96AY4 2481 aa13.75□□□□□ -0.21
ERGIC3-220ENST00000640748 MYH15Q9Y2K3 1946 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 TMEM265A0A087WTH1 108 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 PTPDC1A2A3K4 754 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 VPS37CA5D8V6 355 aaPredicted RBP13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 CCDC69A6NI79 296 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 DCDC2CA8MYV0 355 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 ORC4O43929 436 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 TTLL1O95922 423 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 TIMP1P01033 207 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 OAZ1P54368 228 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 PDE4BQ07343 736 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 WTAPQ15007 396 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 SYNE3Q6ZMZ3 975 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 ARMCX2Q7L311 632 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 SGMS1Q86VZ5 419 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 CHST13Q8NET6 341 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 NEDD1Q8NHV4 660 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 UBAC1Q9BSL1 405 aa13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
ERGIC3-220ENST00000640748 CHD9Q3L8U1 2897 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 ASTN1O14525 1302 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms