RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 VTA1Q9NP79 307 aa23.24■■□□□ 1.31
GABRD-216ENST00000640688 PTPDC1A2A3K4 754 aa23.23■■□□□ 1.31
GABRD-216ENST00000640688 CABYRO75952 493 aa23.23■■□□□ 1.31
GABRD-216ENST00000640688 CCL23P55773 120 aa23.23■■□□□ 1.31
GABRD-216ENST00000640688 IL23AQ9NPF7 189 aa23.23■■□□□ 1.31
GABRD-216ENST00000640688 Q9Y3F1 56 aa23.23■■□□□ 1.31
GABRD-216ENST00000640688 TRIM6-TRIM34B2RNG4 842 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 CALML3P27482 149 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 DUSP28Q4G0W2 176 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 PSRC1Q6PGN9 363 aaPredicted RBP23.22■■□□□ 1.31
GABRD-216ENST00000640688 RILPL2Q969X0 211 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 VWCEQ96DN2 955 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 NOC4LQ9BVI4 516 aaKnown RBP23.22■■□□□ 1.31
GABRD-216ENST00000640688 WNT8AQ9H1J5 351 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 MYO9BQ13459 2157 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 ZMYM6O95789 1325 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 CCDC171Q6TFL3 1326 aa23.22■■□□□ 1.31
GABRD-216ENST00000640688 ZEB2O60315 1214 aa23.21■■□□□ 1.31
GABRD-216ENST00000640688 AKNAD1Q5T1N1 836 aa23.21■■□□□ 1.31
GABRD-216ENST00000640688 PPP1R13LQ8WUF5 828 aa23.21■■□□□ 1.31
GABRD-216ENST00000640688 HERVK_113Q902F9 699 aa23.21■■□□□ 1.31
GABRD-216ENST00000640688 ZKSCAN3Q9BRR0 538 aa23.21■■□□□ 1.31
GABRD-216ENST00000640688 WDR11Q9BZH6 1224 aa23.21■■□□□ 1.31
GABRD-216ENST00000640688 CPVLQ9H3G5 476 aa23.21■■□□□ 1.31
GABRD-216ENST00000640688 NEDD4P46934 1319 aa23.21■■□□□ 1.31
GABRD-216ENST00000640688 CHD7Q9P2D1 2997 aa23.2■■□□□ 1.3
GABRD-216ENST00000640688 ZNF543Q08ER8 600 aa23.2■■□□□ 1.3
GABRD-216ENST00000640688 B4GALNT3Q6L9W6 998 aa23.2■■□□□ 1.3
GABRD-216ENST00000640688 OTOP2Q7RTS6 562 aa23.2■■□□□ 1.3
GABRD-216ENST00000640688 PRDM12Q9H4Q4 367 aa23.2■■□□□ 1.3
GABRD-216ENST00000640688 PRDM6Q9NQX0 595 aa23.2■■□□□ 1.3
GABRD-216ENST00000640688 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
GABRD-216ENST00000640688 MUC3AQ02505 3323 aa23.2■■□□□ 1.3
GABRD-216ENST00000640688 RBM47A0AV96 593 aaKnown RBP23.19■■□□□ 1.3
GABRD-216ENST00000640688 GOLGA8HP0CJ92 632 aa23.19■■□□□ 1.3
GABRD-216ENST00000640688 SNHG28P0DPA3 235 aa23.19■■□□□ 1.3
GABRD-216ENST00000640688 RNF207Q6ZRF8 634 aa23.19■■□□□ 1.3
GABRD-216ENST00000640688 MFSD6Q6ZSS7 791 aa23.19■■□□□ 1.3
GABRD-216ENST00000640688 SCLYQ96I15 445 aa23.19■■□□□ 1.3
GABRD-216ENST00000640688 ALDH8A1Q9H2A2 487 aaPredicted RBP23.19■■□□□ 1.3
GABRD-216ENST00000640688 TRMT13Q9NUP7 481 aaKnown RBP23.19■■□□□ 1.3
GABRD-216ENST00000640688 FGBP02675 491 aa23.18■■□□□ 1.3
GABRD-216ENST00000640688 SDSP20132 328 aa23.18■■□□□ 1.3
GABRD-216ENST00000640688 RPS6P62753 249 aaKnown RBP23.18■■□□□ 1.3
GABRD-216ENST00000640688 PURAQ00577 322 aaKnown RBP23.18■■□□□ 1.3
GABRD-216ENST00000640688 COPS5Q92905 334 aa23.18■■□□□ 1.3
GABRD-216ENST00000640688 YBX2Q9Y2T7 364 aaKnown RBP23.18■■□□□ 1.3
GABRD-216ENST00000640688 SCN5AQ14524 2016 aa23.18■■□□□ 1.3
GABRD-216ENST00000640688 MYL3P08590 195 aa23.17■■□□□ 1.3
GABRD-216ENST00000640688 CYP2C9P11712 490 aa23.17■■□□□ 1.3
GABRD-216ENST00000640688 TTC14Q96N46 770 aa23.17■■□□□ 1.3
GABRD-216ENST00000640688 UBA5Q9GZZ9 404 aa23.17■■□□□ 1.3
GABRD-216ENST00000640688 NKX2-4Q9H2Z4 354 aa23.17■■□□□ 1.3
GABRD-216ENST00000640688 LAMA4Q16363 1823 aa23.17■■□□□ 1.3
GABRD-216ENST00000640688 IGHDP01880 384 aa23.16■■□□□ 1.3
GABRD-216ENST00000640688 ADGRE1Q14246 886 aa23.16■■□□□ 1.3
GABRD-216ENST00000640688 USH1GQ495M9 461 aa23.16■■□□□ 1.3
GABRD-216ENST00000640688 PLEKHM2Q8IWE5 1019 aa23.16■■□□□ 1.3
GABRD-216ENST00000640688 SMC5Q8IY18 1101 aa23.16■■□□□ 1.3
GABRD-216ENST00000640688 OR6J1Q8NGC5 347 aa23.16■■□□□ 1.3
GABRD-216ENST00000640688 PPM1EQ8WY54 764 aa23.16■■□□□ 1.3
GABRD-216ENST00000640688 SCN10AQ9Y5Y9 1956 aa23.16■■□□□ 1.3
GABRD-216ENST00000640688 EDNRBP24530 442 aa23.15■■□□□ 1.3
GABRD-216ENST00000640688 RABGGTBP53611 331 aa23.15■■□□□ 1.3
GABRD-216ENST00000640688 TICAM2Q86XR7 235 aa23.15■■□□□ 1.3
GABRD-216ENST00000640688 TBC1D5Q92609 795 aa23.15■■□□□ 1.3
GABRD-216ENST00000640688 SEZ6LQ9BYH1 1024 aa23.15■■□□□ 1.3
GABRD-216ENST00000640688 REV3LO60673 3130 aa23.15■■□□□ 1.3
GABRD-216ENST00000640688 TNKSO95271 1327 aa23.14■■□□□ 1.3
GABRD-216ENST00000640688 WDR19Q8NEZ3 1342 aa23.14■■□□□ 1.3
GABRD-216ENST00000640688 LOC102724159A0A0B4J2E5 919 aa23.14■■□□□ 1.29
GABRD-216ENST00000640688 ARIH2O95376 493 aa23.14■■□□□ 1.29
GABRD-216ENST00000640688 MYOGP15173 224 aa23.14■■□□□ 1.29
GABRD-216ENST00000640688 PDE4DQ08499 809 aa23.14■■□□□ 1.29
GABRD-216ENST00000640688 PWP2Q15269 919 aaKnown RBP23.14■■□□□ 1.29
GABRD-216ENST00000640688 POLR3EQ9NVU0 708 aa23.14■■□□□ 1.29
GABRD-216ENST00000640688 TTC28Q96AY4 2481 aa23.14■■□□□ 1.29
GABRD-216ENST00000640688 PCP11498 1178 aaKnown RBP23.13■■□□□ 1.29
GABRD-216ENST00000640688 CPT1AP50416 773 aa23.13■■□□□ 1.29
GABRD-216ENST00000640688 RAB30Q15771 203 aa23.13■■□□□ 1.29
GABRD-216ENST00000640688 NBPF20Q3BBV1 942 aa23.13■■□□□ 1.29
GABRD-216ENST00000640688 CWC27Q6UX04 472 aaKnown RBP23.13■■□□□ 1.29
GABRD-216ENST00000640688 ESR2Q92731 530 aa23.13■■□□□ 1.29
GABRD-216ENST00000640688 GAS2L1Q99501 681 aaPredicted RBP23.13■■□□□ 1.29
GABRD-216ENST00000640688 MTG1Q9BT17 334 aaPredicted RBP23.13■■□□□ 1.29
GABRD-216ENST00000640688 MSRAQ9UJ68 235 aa23.13■■□□□ 1.29
GABRD-216ENST00000640688 ZNF213O14771 459 aa23.12■■□□□ 1.29
GABRD-216ENST00000640688 KDM4AO75164 1064 aa23.12■■□□□ 1.29
GABRD-216ENST00000640688 TTLL4Q14679 1199 aa23.12■■□□□ 1.29
GABRD-216ENST00000640688 PPP2R5BQ15173 497 aa23.12■■□□□ 1.29
GABRD-216ENST00000640688 CHD1LQ86WJ1 897 aa23.12■■□□□ 1.29
GABRD-216ENST00000640688 DNERQ8NFT8 737 aa23.12■■□□□ 1.29
GABRD-216ENST00000640688 RNF41Q9H4P4 317 aaPredicted RBP23.12■■□□□ 1.29
GABRD-216ENST00000640688 RBAK-RBAKDNI3L0D1 243 aa23.11■■□□□ 1.29
GABRD-216ENST00000640688 CCDC85BQ15834 202 aaPredicted RBP23.11■■□□□ 1.29
GABRD-216ENST00000640688 CDC37Q16543 378 aaPredicted RBP23.11■■□□□ 1.29
GABRD-216ENST00000640688 FAM47CQ5HY64 1035 aa23.11■■□□□ 1.29
GABRD-216ENST00000640688 GPATCH4Q5T3I0 446 aaKnown RBP23.11■■□□□ 1.29
GABRD-216ENST00000640688 DEFB128Q7Z7B8 93 aa23.11■■□□□ 1.29
GABRD-216ENST00000640688 DGKHQ86XP1 1220 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms