RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 PDGFCQ9NRA1 345 aa18.41■□□□□ 0.54
SPIN3-240ENST00000640507 MRPL11Q9Y3B7 192 aaKnown RBP18.41■□□□□ 0.54
SPIN3-240ENST00000640507 Q9Y3F1 56 aa18.41■□□□□ 0.54
SPIN3-240ENST00000640507 CTAGE5O15320 804 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 IRX5P78411 483 aaPredicted RBP18.4■□□□□ 0.54
SPIN3-240ENST00000640507 GNASQ5JWF2 1037 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 CREB3L3Q68CJ9 461 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
SPIN3-240ENST00000640507 MCF2L2Q86YR7 1114 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 FBXO16Q8IX29 292 aaPredicted RBP18.4■□□□□ 0.54
SPIN3-240ENST00000640507 MPHOSPH6Q99547 160 aaKnown RBP18.4■□□□□ 0.54
SPIN3-240ENST00000640507 AMNQ9BXJ7 453 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 RIOX1Q9H6W3 641 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 STARD7Q9NQZ5 370 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 PRKAG2Q9UGJ0 569 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 B4DLN1 442 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 ASGR1P07306 291 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 SMPD1P17405 629 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 EDNRBP24530 442 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 MCM5P33992 734 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 MRPL12P52815 198 aaKnown RBP18.4■□□□□ 0.54
SPIN3-240ENST00000640507 CATIPQ7Z7H3 387 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 TMTC2Q8N394 836 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 TBC1D5Q92609 795 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 GLT1D1Q96MS3 346 aa18.4■□□□□ 0.54
SPIN3-240ENST00000640507 ELP1O95163 1332 aa18.39■□□□□ 0.53
SPIN3-240ENST00000640507 RBM47A0AV96 593 aaKnown RBP18.39■□□□□ 0.53
SPIN3-240ENST00000640507 ZBTB5O15062 677 aa18.39■□□□□ 0.53
SPIN3-240ENST00000640507 DYNC1LI2O43237 492 aaPredicted RBP18.39■□□□□ 0.53
SPIN3-240ENST00000640507 PRC1O43663 620 aa18.39■□□□□ 0.53
SPIN3-240ENST00000640507 CDC45O75419 566 aa18.39■□□□□ 0.53
SPIN3-240ENST00000640507 MDM2Q00987 491 aaPredicted RBP18.39■□□□□ 0.53
SPIN3-240ENST00000640507 TLE2Q04725 743 aa18.39■□□□□ 0.53
SPIN3-240ENST00000640507 TMEM87BQ96K49 555 aa18.39■□□□□ 0.53
SPIN3-240ENST00000640507 MAP3K14Q99558 947 aa18.39■□□□□ 0.53
SPIN3-240ENST00000640507 LY9Q9HBG7 655 aa18.39■□□□□ 0.53
SPIN3-240ENST00000640507 NEFLP07196 543 aa18.38■□□□□ 0.53
SPIN3-240ENST00000640507 PDE4DQ08499 809 aa18.38■□□□□ 0.53
SPIN3-240ENST00000640507 DUSP28Q4G0W2 176 aa18.38■□□□□ 0.53
SPIN3-240ENST00000640507 RNF20Q5VTR2 975 aa18.38■□□□□ 0.53
SPIN3-240ENST00000640507 TLK2Q86UE8 772 aa18.38■□□□□ 0.53
SPIN3-240ENST00000640507 SYTL5Q8TDW5 730 aaPredicted RBP18.38■□□□□ 0.53
SPIN3-240ENST00000640507 TOX2Q96NM4 488 aa18.38■□□□□ 0.53
SPIN3-240ENST00000640507 LBHD1Q9BQE6 289 aaPredicted RBP18.38■□□□□ 0.53
SPIN3-240ENST00000640507 WDR11Q9BZH6 1224 aa18.38■□□□□ 0.53
SPIN3-240ENST00000640507 UBE2OQ9C0C9 1292 aaKnown RBP18.38■□□□□ 0.53
SPIN3-240ENST00000640507 AP5M1Q9H0R1 490 aa18.38■□□□□ 0.53
SPIN3-240ENST00000640507 CYTH3O43739 400 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 LIFRP42702 1097 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 BEX3Q00994 111 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 TRAF1Q13077 416 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 SLC35G1Q2M3R5 365 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 TMEM63BQ5T3F8 832 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 ANKRD33Q7Z3H0 272 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 TAAR1Q96RJ0 339 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 PDLIM7Q9NR12 457 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 MAP3K20Q9NYL2 800 aaKnown RBP18.37■□□□□ 0.53
SPIN3-240ENST00000640507 PCDH10Q9P2E7 1040 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 PCDHA1Q9Y5I3 950 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 MCM3APO60318 1980 aa18.37■□□□□ 0.53
SPIN3-240ENST00000640507 SH2B2O14492 632 aaPredicted RBP18.36■□□□□ 0.53
SPIN3-240ENST00000640507 PPP1R11O60927 126 aaPredicted RBP18.36■□□□□ 0.53
SPIN3-240ENST00000640507 DDAH1O94760 285 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 CDK7P50613 346 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 GHRHRQ02643 423 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 FSCN1Q16658 493 aaKnown RBP18.36■□□□□ 0.53
SPIN3-240ENST00000640507 TDHQ8IZJ6 230 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 ZNF654Q8IZM8 581 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 SAMD3Q8N6K7 520 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 NSUN6Q8TEA1 469 aaKnown RBP18.36■□□□□ 0.53
SPIN3-240ENST00000640507 VTI1AQ96AJ9 217 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 PIGSQ96S52 555 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 PRDM5Q9NQX1 630 aaPredicted RBP18.36■□□□□ 0.53
SPIN3-240ENST00000640507 GPHNQ9NQX3 736 aaPredicted RBP18.36■□□□□ 0.53
SPIN3-240ENST00000640507 COL20A1Q9P218 1284 aa18.36■□□□□ 0.53
SPIN3-240ENST00000640507 TRIM43BA6NCK2 446 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 OPLAHO14841 1288 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 ZEB2O60315 1214 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 PQBP1O60828 265 aaKnown RBP18.35■□□□□ 0.53
SPIN3-240ENST00000640507 CABYRO75952 493 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 CFBP00751 764 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 CLTBP09497 229 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 SMARCA1P28370 1054 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 COL9A3Q14050 684 aaPredicted RBP18.35■□□□□ 0.53
SPIN3-240ENST00000640507 TSGA10IPQ3SY00 556 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 SH3RF1Q7Z6J0 888 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 CTCFLQ8NI51 663 aaPredicted RBP18.35■□□□□ 0.53
SPIN3-240ENST00000640507 TRIM43Q96BQ3 446 aaPredicted RBP18.35■□□□□ 0.53
SPIN3-240ENST00000640507 IWS1Q96ST2 819 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 RMDN3Q96TC7 470 aa18.35■□□□□ 0.53
SPIN3-240ENST00000640507 PNMA6FA0A0J9YX94 578 aa18.34■□□□□ 0.53
SPIN3-240ENST00000640507 A0A0U1RQG5 324 aaPredicted RBP18.34■□□□□ 0.53
SPIN3-240ENST00000640507 CCDC69A6NI79 296 aa18.34■□□□□ 0.53
SPIN3-240ENST00000640507 DCDC2CA8MYV0 355 aa18.34■□□□□ 0.53
SPIN3-240ENST00000640507 ARVCFO00192 962 aa18.34■□□□□ 0.53
SPIN3-240ENST00000640507 NKRFO15226 690 aaKnown RBP eCLIP18.34■□□□□ 0.53
SPIN3-240ENST00000640507 PTGS1P23219 599 aa18.34■□□□□ 0.53
SPIN3-240ENST00000640507 KIF5BP33176 963 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms