RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 GOLGA8AA7E2F4 631 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 PFKFB2O60825 505 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 ALAS1P13196 640 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 CYBAP13498 195 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 CAPN2P17655 700 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 PDIA3P30101 505 aaKnown RBP14.52□□□□□ -0.08
PAX6-272ENST00000640460 CDC27P30260 824 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 METAP2P50579 478 aaKnown RBP eCLIP14.52□□□□□ -0.08
PAX6-272ENST00000640460 KCTD2Q14681 263 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 RTN1Q16799 776 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 ZNF792Q3KQV3 632 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 LHX8Q68G74 356 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 TMTC3Q6ZXV5 915 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 PIGSQ96S52 555 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 SPZ1Q9BXG8 430 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 SLC5A4Q9NY91 659 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 NID2Q14112 1375 aa14.52□□□□□ -0.08
PAX6-272ENST00000640460 SMARCA1P28370 1054 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 GJB2P29033 226 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 MCM4P33991 863 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 GNAQP50148 359 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 PRPF38BQ5VTL8 546 aaKnown RBP14.52□□□□□ -0.09
PAX6-272ENST00000640460 CLEC17AQ6ZS10 378 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.52□□□□□ -0.09
PAX6-272ENST00000640460 HOMER1Q86YM7 354 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 CCDC82Q8N4S0 544 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 ZNF274Q96GC6 653 aaPredicted RBP14.52□□□□□ -0.09
PAX6-272ENST00000640460 TRERF1Q96PN7 1200 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 RNF146Q9NTX7 359 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 RBM28Q9NW13 759 aaKnown RBP14.52□□□□□ -0.09
PAX6-272ENST00000640460 SMC3Q9UQE7 1217 aa14.52□□□□□ -0.09
PAX6-272ENST00000640460 DNAJC25-GNG10A0A024R161 153 aa14.51□□□□□ -0.09
PAX6-272ENST00000640460 ZBTB5O15062 677 aa14.51□□□□□ -0.09
PAX6-272ENST00000640460 PPP1R11O60927 126 aaPredicted RBP14.51□□□□□ -0.09
PAX6-272ENST00000640460 ADD1P35611 737 aaKnown RBP14.51□□□□□ -0.09
PAX6-272ENST00000640460 USH1GQ495M9 461 aa14.51□□□□□ -0.09
PAX6-272ENST00000640460 MUM1L1Q5H9M0 696 aa14.51□□□□□ -0.09
PAX6-272ENST00000640460 ANKLE1Q8NAG6 615 aa14.51□□□□□ -0.09
PAX6-272ENST00000640460 CHST13Q8NET6 341 aa14.51□□□□□ -0.09
PAX6-272ENST00000640460 PIBF1Q8WXW3 757 aa14.51□□□□□ -0.09
PAX6-272ENST00000640460 PAWRQ96IZ0 340 aaKnown RBP14.51□□□□□ -0.09
PAX6-272ENST00000640460 DIS3Q9Y2L1 958 aaKnown RBP14.51□□□□□ -0.09
PAX6-272ENST00000640460 CTDNEP1O95476 244 aa14.5□□□□□ -0.09
PAX6-272ENST00000640460 SYT1P21579 422 aa14.5□□□□□ -0.09
PAX6-272ENST00000640460 FUT2Q10981 343 aa14.5□□□□□ -0.09
PAX6-272ENST00000640460 TKFCQ3LXA3 575 aa14.5□□□□□ -0.09
PAX6-272ENST00000640460 PRAMEF19Q5SWL8 479 aa14.5□□□□□ -0.09
PAX6-272ENST00000640460 CHAMP1Q96JM3 812 aa14.5□□□□□ -0.09
PAX6-272ENST00000640460 ACAD9Q9H845 621 aa14.5□□□□□ -0.09
PAX6-272ENST00000640460 NCOA5Q9HCD5 579 aaKnown RBP14.5□□□□□ -0.09
PAX6-272ENST00000640460 DDX20Q9UHI6 824 aaKnown RBP14.5□□□□□ -0.09
PAX6-272ENST00000640460 CNTNAP5Q8WYK1 1306 aa14.5□□□□□ -0.09
PAX6-272ENST00000640460 JAK2O60674 1132 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 CNGA1P29973 690 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 CCT2P78371 535 aaKnown RBP14.49□□□□□ -0.09
PAX6-272ENST00000640460 PPP2R5BQ15173 497 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 FOXD4L5Q5VV16 416 aaPredicted RBP14.49□□□□□ -0.09
PAX6-272ENST00000640460 FBXO11Q86XK2 927 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 FOXD4L4Q8WXT5 416 aaPredicted RBP14.49□□□□□ -0.09
PAX6-272ENST00000640460 FBXO40Q9UH90 709 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 PNMA2Q9UL42 364 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 PNMA6FA0A0J9YX94 578 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 hCG_1642624A0A1W2PR95 340 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 NFIBO00712 420 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 BAG4O95429 457 aaKnown RBP14.49□□□□□ -0.09
PAX6-272ENST00000640460 ANKRD35Q8N283 1001 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 CLEC4DQ8WXI8 215 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 RRP36Q96EU6 259 aaKnown RBP14.49□□□□□ -0.09
PAX6-272ENST00000640460 DDX11Q96FC9 970 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 FGD4Q96M96 766 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 TINF2Q9BSI4 451 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 AMNQ9BXJ7 453 aa14.49□□□□□ -0.09
PAX6-272ENST00000640460 A1CFQ9NQ94 594 aaKnown RBP14.49□□□□□ -0.09
PAX6-272ENST00000640460 LRRC37A2A6NM11 1700 aa14.48□□□□□ -0.09
PAX6-272ENST00000640460 CCDC196A0A1B0GTZ2 297 aa14.48□□□□□ -0.09
PAX6-272ENST00000640460 NTRK3Q16288 839 aa14.48□□□□□ -0.09
PAX6-272ENST00000640460 NECAB2Q7Z6G3 386 aa14.48□□□□□ -0.09
PAX6-272ENST00000640460 SMARCC2Q8TAQ2 1214 aa14.48□□□□□ -0.09
PAX6-272ENST00000640460 HTATIP2Q9BUP3 242 aa14.48□□□□□ -0.09
PAX6-272ENST00000640460 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
PAX6-272ENST00000640460 PFASO15067 1338 aa14.47□□□□□ -0.09
PAX6-272ENST00000640460 ABCB11O95342 1321 aa14.47□□□□□ -0.09
PAX6-272ENST00000640460 SEPT4O43236 478 aa14.47□□□□□ -0.09
PAX6-272ENST00000640460 STX6O43752 255 aa14.47□□□□□ -0.09
PAX6-272ENST00000640460 MSCO60682 206 aa14.47□□□□□ -0.09
PAX6-272ENST00000640460 ANO1Q5XXA6 986 aa14.47□□□□□ -0.09
PAX6-272ENST00000640460 NSUN7Q8NE18 718 aaKnown RBP14.47□□□□□ -0.09
PAX6-272ENST00000640460 DPF3Q92784 378 aa14.47□□□□□ -0.09
PAX6-272ENST00000640460 PPFIA3O75145 1194 aa14.46□□□□□ -0.09
PAX6-272ENST00000640460 MAMDC4Q6UXC1 1216 aa14.46□□□□□ -0.09
PAX6-272ENST00000640460 NSMFQ6X4W1 530 aa14.46□□□□□ -0.09
PAX6-272ENST00000640460 C11orf49Q9H6J7 331 aa14.46□□□□□ -0.09
PAX6-272ENST00000640460 CYP39A1Q9NYL5 469 aa14.46□□□□□ -0.09
PAX6-272ENST00000640460 SEC63Q9UGP8 760 aaKnown RBP14.46□□□□□ -0.09
PAX6-272ENST00000640460 MTMR6Q9Y217 621 aa14.46□□□□□ -0.09
PAX6-272ENST00000640460 V9GY48 417 aaPredicted RBP14.46□□□□□ -0.09
PAX6-272ENST00000640460 OPLAHO14841 1288 aa14.46□□□□□ -0.1
PAX6-272ENST00000640460 SNAI1O95863 264 aaPredicted RBP14.46□□□□□ -0.1
PAX6-272ENST00000640460 ZNF865P0CJ78 1059 aaPredicted RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms