RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 TNNI2P48788 182 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 KLK7P49862 253 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 UBE2SQ16763 222 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 ASPRV1Q53RT3 343 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 ANKRD40Q6AI12 368 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 CERS5Q8N5B7 392 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 ZNF507Q8TCN5 953 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 CRAMP1Q96RY5 1269 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 NRXN2Q9P2S2 1712 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 GREB1LQ9C091 1923 aaPredicted RBP10.04□□□□□ -0.8
RTTN-216ENST00000640376 A0A1W2PQC6 194 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 BICDL2A1A5D9 508 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 NDUFA10O95299 355 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 ATP2B2Q01814 1243 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 GABPAQ06546 454 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 SRGAP1Q7Z6B7 1085 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 KIAA0895Q8NCT3 520 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 OR8K1Q8NGG5 319 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 CDK5RAP3Q96JB5 506 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 NAPGQ99747 312 aaPredicted RBP10.04□□□□□ -0.8
RTTN-216ENST00000640376 C7orf25Q9BPX7 421 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 PARD6BQ9BYG5 372 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 SLC39A2Q9NP94 309 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 LRWD1Q9UFC0 647 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 CDC23Q9UJX2 597 aa10.04□□□□□ -0.8
RTTN-216ENST00000640376 REXO2Q9Y3B8 237 aaKnown RBP10.04□□□□□ -0.8
RTTN-216ENST00000640376 SLURP2P0DP57 97 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 TRIM21P19474 475 aaKnown RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 MTIF2P46199 727 aaKnown RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 DNM2P50570 870 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 GRB10Q13322 594 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 MCM6Q14566 821 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 CCDC96Q2M329 555 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 CC2D1AQ6P1N0 951 aaPredicted RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 ZNF771Q7L3S4 317 aaPredicted RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 NOC3LQ8WTT2 800 aaKnown RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 PCMTD1Q96MG8 357 aaPredicted RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 DNAJC7Q99615 494 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 SERPINB13Q9UIV8 391 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 GOLGB1Q14789 3259 aaKnown RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 hCG_1984214I3L0E3 225 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 MPHOSPH10O00566 681 aaKnown RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 SRGNP10124 158 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 AMPD3Q01432 767 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 TMEM266Q2M3C6 531 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 CNNM4Q6P4Q7 775 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 DYMQ7RTS9 669 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 ZNF713Q8N859 430 aaPredicted RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 MTMR9Q96QG7 549 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 AGPAT5Q9NUQ2 364 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 GUCA1BQ9UMX6 200 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 TFR2Q9UP52 801 aa10.03□□□□□ -0.8
RTTN-216ENST00000640376 EPN1Q9Y6I3 576 aaPredicted RBP10.03□□□□□ -0.8
RTTN-216ENST00000640376 NKRFO15226 690 aaKnown RBP eCLIP10.02□□□□□ -0.8
RTTN-216ENST00000640376 TTLL1O95922 423 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 SLC16A2P36021 539 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 PLA2G4AP47712 749 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 SEMA3FQ13275 785 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.8
RTTN-216ENST00000640376 TTBK2Q6IQ55 1244 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 SV2BQ7L1I2 683 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 COA1Q9GZY4 146 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 BLOC1S4Q9NUP1 217 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 USP40Q9NVE5 1235 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 CAPN11Q9UMQ6 739 aa10.02□□□□□ -0.8
RTTN-216ENST00000640376 SIPA1L1O43166 1804 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 IGKV6D-41A0A0C4DH26 115 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 MYMKA6NI61 221 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 RAD21O60216 631 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 PPP1R11O60927 126 aaPredicted RBP10.02□□□□□ -0.81
RTTN-216ENST00000640376 TRIM37O94972 964 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 SNHG28P0DPA3 235 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 ZNF543Q08ER8 600 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 TBC1D8BQ0IIM8 1120 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 ORC2Q13416 577 aaPredicted RBP10.02□□□□□ -0.81
RTTN-216ENST00000640376 WDR59Q6PJI9 974 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 FAM114A1Q8IWE2 563 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 SP8Q8IXZ3 490 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 ADGRF4Q8IZF3 695 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 CEP112Q8N8E3 955 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 SNX29Q8TEQ0 813 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 LARP4BQ92615 738 aaKnown RBP10.02□□□□□ -0.81
RTTN-216ENST00000640376 PNMA5Q96PV4 448 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 NOC4LQ9BVI4 516 aaKnown RBP10.02□□□□□ -0.81
RTTN-216ENST00000640376 JMJD4Q9H9V9 463 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 EDIL3O43854 480 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 SASH3O75995 380 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 TBC1D8O95759 1140 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 SHMT1P34896 483 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 KCTD1Q719H9 257 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 GJA10Q969M2 543 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 ATP6V0A2Q9Y487 856 aa10.02□□□□□ -0.81
RTTN-216ENST00000640376 IDEP14735 1019 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 FXR2P51116 673 aaKnown RBP eCLIP10.01□□□□□ -0.81
RTTN-216ENST00000640376 HERVK_113P62684 666 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 TERF2Q15554 542 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 MIIPQ5JXC2 388 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 SLC27A3Q5K4L6 730 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms