RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 CCDC42Q96M95 316 aa13.93□□□□□ -0.18
SPIN3-232ENST00000639956 ANKRD2Q9GZV1 360 aa13.93□□□□□ -0.18
SPIN3-232ENST00000639956 KBTBD4Q9NVX7 518 aa13.93□□□□□ -0.18
SPIN3-232ENST00000639956 SEC63Q9UGP8 760 aaKnown RBP13.93□□□□□ -0.18
SPIN3-232ENST00000639956 ABCA3Q99758 1704 aa13.93□□□□□ -0.18
SPIN3-232ENST00000639956 TRIM66O15016 1216 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 BUB1O43683 1085 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 MARCH6O60337 910 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 MOCS3O95396 460 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 SBK1Q52WX2 424 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 KIAA0895Q8NCT3 520 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 SMARCC1Q92922 1105 aaPredicted RBP13.92□□□□□ -0.18
SPIN3-232ENST00000639956 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 CAPN11Q9UMQ6 739 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 SLC37A4O43826 429 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 UFL1O94874 794 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 BAG3O95817 575 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 PCP11498 1178 aaKnown RBP13.92□□□□□ -0.18
SPIN3-232ENST00000639956 TM4SF1P30408 202 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 WHAMMP3Q1A5X7 153 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 CT47A1Q5JQC4 288 aaPredicted RBP13.92□□□□□ -0.18
SPIN3-232ENST00000639956 DNAAF5Q86Y56 855 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 C10orf67Q8IYJ2 551 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 HDAC7Q8WUI4 952 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 SEMA6BQ9H3T3 888 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 CCNL1Q9UK58 526 aaPredicted RBP13.92□□□□□ -0.18
SPIN3-232ENST00000639956 KDM4FA0A1W2PPD8 638 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 M0R2N6 131 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 ZNF263O14978 683 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 DNM2P50570 870 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 DNAJC21Q5F1R6 531 aaKnown RBP13.92□□□□□ -0.18
SPIN3-232ENST00000639956 RRAGAQ7L523 313 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 MSANTD4Q8NCY6 345 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 MXD3Q9BW11 206 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 HAUS4Q9H6D7 363 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 CAPN6Q9Y6Q1 641 aa13.92□□□□□ -0.18
SPIN3-232ENST00000639956 ATP8B1O43520 1251 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 KRT86O43790 486 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 TRIM14Q14142 442 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 KCNK18Q7Z418 384 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 NEK8Q86SG6 692 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 RRP36Q96EU6 259 aaKnown RBP13.91□□□□□ -0.18
SPIN3-232ENST00000639956 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
SPIN3-232ENST00000639956 RTCBQ9Y3I0 505 aaKnown RBP13.91□□□□□ -0.18
SPIN3-232ENST00000639956 MYMKA6NI61 221 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 CCNE1P24864 410 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 EEF1GP26641 437 aaKnown RBP13.91□□□□□ -0.18
SPIN3-232ENST00000639956 RFC4P35249 363 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 SPTY2D1Q68D10 685 aaPredicted RBP13.91□□□□□ -0.18
SPIN3-232ENST00000639956 TTC19Q6DKK2 380 aaPredicted RBP13.91□□□□□ -0.18
SPIN3-232ENST00000639956 TRAPPC11Q7Z392 1133 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 TXLNBQ8N3L3 684 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 NGLY1Q96IV0 654 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 MMTAG2Q9BU76 263 aaKnown RBP13.91□□□□□ -0.18
SPIN3-232ENST00000639956 NARFQ9UHQ1 456 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 RAB21Q9UL25 225 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 FLT1P17948 1338 aa13.91□□□□□ -0.18
SPIN3-232ENST00000639956 PDS5AQ29RF7 1337 aaKnown RBP13.91□□□□□ -0.18
SPIN3-232ENST00000639956 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
SPIN3-232ENST00000639956 C6orf229H3BNL8 230 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 AKR1B10O60218 316 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 SRGNP10124 158 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 CYLC1P35663 651 aaPredicted RBP13.9□□□□□ -0.18
SPIN3-232ENST00000639956 KIF5AQ12840 1032 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 TDRD12Q587J7 1177 aaKnown RBP13.9□□□□□ -0.18
SPIN3-232ENST00000639956 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
SPIN3-232ENST00000639956 CALML4Q96GE6 196 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 DNAJC7Q99615 494 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 PYM1Q9BRP8 204 aaKnown RBP13.9□□□□□ -0.18
SPIN3-232ENST00000639956 NYXQ9GZU5 481 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 THAP9Q9H5L6 903 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 FAM204AQ9H8W3 233 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 C6orf50Q9HD87 102 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
SPIN3-232ENST00000639956 GNAQP50148 359 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 MIIPQ5JXC2 388 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 MFSD14BQ5SR56 506 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 TTBK2Q6IQ55 1244 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 NFRKBQ6P4R8 1299 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 REXO1Q8N1G1 1221 aaKnown RBP13.9□□□□□ -0.18
SPIN3-232ENST00000639956 CCSER1Q9C0I3 900 aa13.9□□□□□ -0.18
SPIN3-232ENST00000639956 FAM196BA6NMK8 535 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 MPHOSPH10O00566 681 aaKnown RBP13.89□□□□□ -0.19
SPIN3-232ENST00000639956 EIF4A3P38919 411 aaKnown RBP13.89□□□□□ -0.19
SPIN3-232ENST00000639956 GPSM2P81274 684 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 SPA17Q15506 151 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 CALCRLQ16602 461 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 SNX29Q8TEQ0 813 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 KRT83P78385 493 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 TMED8Q6PL24 325 aaPredicted RBP13.89□□□□□ -0.19
SPIN3-232ENST00000639956 SV2BQ7L1I2 683 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 IFIH1Q9BYX4 1025 aaKnown RBP13.89□□□□□ -0.19
SPIN3-232ENST00000639956 RSPH14Q9UHP6 348 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 SPATA31A5Q5VU36 1347 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 SPATA31A7Q8IWB4 1347 aa13.89□□□□□ -0.19
SPIN3-232ENST00000639956 PLCH1Q4KWH8 1693 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms