RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 CCDC50Q8IVM0 306 aa9.27□□□□□ -0.92
HNRNPU-222ENST00000639880 STAG2Q8N3U4 1231 aa9.27□□□□□ -0.92
HNRNPU-222ENST00000639880 U2AF1L4Q8WU68 220 aaKnown RBP9.27□□□□□ -0.92
HNRNPU-222ENST00000639880 TEKT1Q969V4 418 aa9.27□□□□□ -0.92
HNRNPU-222ENST00000639880 TMEM47Q9BQJ4 181 aa9.27□□□□□ -0.92
HNRNPU-222ENST00000639880 GLT8D2Q9H1C3 349 aa9.27□□□□□ -0.92
HNRNPU-222ENST00000639880 ARHGEF35A5YM69 484 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 VGLL3A8MV65 326 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 MOCS3O95396 460 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 NYAP1Q6ZVC0 841 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 NUCKS1Q9H1E3 243 aaKnown RBP9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 CTTNBP2NLQ9P2B4 639 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 USP21Q9UK80 565 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 LEMD3Q9Y2U8 911 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 MORC2Q9Y6X9 1032 aaPredicted RBP9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 CCDC169A6NNP5 214 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 ATP2B4P23634 1241 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 CDK8P49336 464 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 PLCB3Q01970 1234 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 PPP1R7Q15435 360 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 SPICE1Q8N0Z3 855 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 FAM71BQ8TC56 605 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 BCAS4Q8TDM0 211 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 CCDC114Q96M63 670 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 HDAC6Q9UBN7 1215 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 HDAC9Q9UKV0 1011 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 SIGLEC1Q9BZZ2 1709 aa9.27□□□□□ -0.93
HNRNPU-222ENST00000639880 GTF2A1P52655 376 aaPredicted RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 HNRNPH2P55795 449 aaKnown RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 GNGT1P63211 74 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 SLC7A5Q01650 507 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 NDST4Q9H3R1 872 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 MED4Q9NPJ6 270 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 HOMER2Q9NSB8 354 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 ADAM21Q9UKJ8 722 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 PNPLA7Q6ZV29 1317 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 POTEMA6NI47 508 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 MEIS1O00470 390 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 RNF40O75150 1001 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 TADA3O75528 432 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 NR2F2P24468 414 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 HMGB2P26583 209 aaKnown RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 FXR1P51114 621 aaKnown RBP eCLIP9.26□□□□□ -0.932e-8■□□□□ 9.2
HNRNPU-222ENST00000639880 CASP7P55210 303 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 FKBP3Q00688 224 aaKnown RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 MAN2A1Q16706 1144 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 TXNRD1Q16881 649 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 NAA35Q5VZE5 725 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 USP37Q86T82 979 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 HOOK3Q86VS8 718 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 CEP57Q86XR8 500 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 TC2NQ8N9U0 490 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 IQCDQ96DY2 449 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 SCLT1Q96NL6 688 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 TSKSQ9UJT2 592 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 KDM3AQ9Y4C1 1321 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 MEGF6O75095 1541 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 A0A1W2PRG0 241 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 STAT1P42224 750 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 CALCOCO2Q13137 446 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 PTPAQ15257 358 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 CEP85LQ5SZL2 805 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 TBC1D9BQ66K14 1250 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 GSTA5Q7RTV2 222 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 RETREG2Q8NC44 543 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 CHP1Q99653 195 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 PPANQ9NQ55 473 aaKnown RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 MTRF1LQ9UGC7 380 aaKnown RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 UTP11Q9Y3A2 253 aaKnown RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 KDM6AO15550 1401 aaPredicted RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 ANKRD65E5RJM6 399 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 GNA14O95837 355 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 FTCDO95954 541 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 INPP5BP32019 993 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 ATP2C1P98194 919 aaPredicted RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 CERKLQ49MI3 558 aaPredicted RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 SLFN13Q68D06 897 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 FAM212AQ96EL1 285 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 KRT12Q99456 494 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 THAP9Q9H5L6 903 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 MAGEF1Q9HAY2 307 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 KCNK9Q9NPC2 374 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 MKRN1Q9UHC7 482 aaKnown RBP9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 SERPINB13Q9UIV8 391 aa9.26□□□□□ -0.93
HNRNPU-222ENST00000639880 LGALS16A8MUM7 142 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 HGSO14964 777 aaPredicted RBP9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 KIF4AO95239 1232 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 KRT5P13647 590 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 KRT71Q3SY84 523 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 ILDR1Q86SU0 546 aaPredicted RBP9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 HPS3Q969F9 1004 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 LRRC45Q96CN5 670 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 AGXT2Q9BYV1 514 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 POLD4Q9HCU8 107 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 MRFAP1Q9Y605 127 aa9.25□□□□□ -0.93
HNRNPU-222ENST00000639880 KRIT1O00522 736 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms