RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 ZNF592Q92610 1267 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 TMEM60Q9H2L4 133 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 ZBTB21Q9ULJ3 1066 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 RPS12P25398 132 aaKnown RBP17.02■□□□□ 0.32
TRIM3-215ENST00000639856 RASA3Q14644 834 aa17.02■□□□□ 0.32
TRIM3-215ENST00000639856 TBC1D10BQ4KMP7 808 aaPredicted RBP17.02■□□□□ 0.32
TRIM3-215ENST00000639856 SPECC1LQ69YQ0 1117 aa17.02■□□□□ 0.32
TRIM3-215ENST00000639856 KRT25Q7Z3Z0 450 aa17.02■□□□□ 0.32
TRIM3-215ENST00000639856 PPP1R13BQ96KQ4 1090 aa17.02■□□□□ 0.32
TRIM3-215ENST00000639856 BLZF1Q9H2G9 400 aa17.02■□□□□ 0.32
TRIM3-215ENST00000639856 A0A1B0GTH6 734 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 CDC25AP30304 524 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 PRPHP41219 470 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 ADCY7P51828 1080 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 SNAP25P60880 206 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 NR1I3Q14994 352 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.31
TRIM3-215ENST00000639856 PTPN21Q16825 1174 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 KIAA1755Q5JYT7 1200 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 SMYD4Q8IYR2 804 aaPredicted RBP17.02■□□□□ 0.31
TRIM3-215ENST00000639856 DISC1Q9NRI5 854 aa17.02■□□□□ 0.31
TRIM3-215ENST00000639856 STAT6P42226 847 aa17.01■□□□□ 0.31
TRIM3-215ENST00000639856 STX17P56962 302 aa17.01■□□□□ 0.31
TRIM3-215ENST00000639856 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
TRIM3-215ENST00000639856 QRICH1Q2TAL8 776 aa17.01■□□□□ 0.31
TRIM3-215ENST00000639856 CDKAL1Q5VV42 579 aa17.01■□□□□ 0.31
TRIM3-215ENST00000639856 ZNF710Q8N1W2 664 aa17.01■□□□□ 0.31
TRIM3-215ENST00000639856 GMCL1Q96IK5 515 aa17.01■□□□□ 0.31
TRIM3-215ENST00000639856 CNOT7Q9UIV1 285 aaKnown RBP17.01■□□□□ 0.31
TRIM3-215ENST00000639856 TBC1D12O60347 775 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
TRIM3-215ENST00000639856 UBE2SQ16763 222 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 APTXQ7Z2E3 356 aaKnown RBP17■□□□□ 0.31
TRIM3-215ENST00000639856 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
TRIM3-215ENST00000639856 KIF18AQ8NI77 898 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 CCSER1Q9C0I3 900 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 RMND1Q9NWS8 449 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 CCP110O43303 1012 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 LETM2Q2VYF4 491 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 TBCKQ8TEA7 893 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 TEPSINQ96N21 525 aa17■□□□□ 0.31
TRIM3-215ENST00000639856 ATAD5Q96QE3 1844 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 RPN1P04843 607 aaKnown RBP16.99■□□□□ 0.31
TRIM3-215ENST00000639856 BMP3P12645 472 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 TAL1P17542 331 aaPredicted RBP16.99■□□□□ 0.31
TRIM3-215ENST00000639856 UBA7P41226 1012 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 NAALADL2Q58DX5 795 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 ZNF658Q5TYW1 1059 aaPredicted RBP16.99■□□□□ 0.31
TRIM3-215ENST00000639856 FCHSD1Q86WN1 690 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 TMEM139Q8IV31 216 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 CTAGE1Q96RT6 745 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 GLIS2Q9BZE0 524 aaPredicted RBP16.99■□□□□ 0.31
TRIM3-215ENST00000639856 SPON1Q9HCB6 807 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
TRIM3-215ENST00000639856 TUBB4AP04350 444 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 CAP2P40123 477 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 TNNI2P48788 182 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 GOLGA8FQ08AF8 430 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 GOLGA8DPQ0D2H9 430 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
TRIM3-215ENST00000639856 RRAGBQ5VZM2 374 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 PPP1R18Q6NYC8 613 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 NEK8Q86SG6 692 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 TC2NQ8N9U0 490 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 ARHGEF10LQ9HCE6 1279 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 RIC8AQ9NPQ8 531 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 CTNND2Q9UQB3 1225 aa16.99■□□□□ 0.31
TRIM3-215ENST00000639856 PP2D1A8MPX8 630 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 ARHGAP6O43182 974 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 SYCP1Q15431 976 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 ZYXQ15942 572 aaKnown RBP16.98■□□□□ 0.31
TRIM3-215ENST00000639856 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 ARHGAP27Q6ZUM4 889 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 AK8Q96MA6 479 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 FHDC1Q9C0D6 1143 aaPredicted RBP16.98■□□□□ 0.31
TRIM3-215ENST00000639856 ADD3Q9UEY8 706 aaKnown RBP16.98■□□□□ 0.31
TRIM3-215ENST00000639856 RWDD2AQ9UIY3 292 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 HACL1Q9UJ83 578 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 TMX2Q9Y320 296 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 SMCHD1A6NHR9 2005 aa16.98■□□□□ 0.31
TRIM3-215ENST00000639856 EDIL3O43854 480 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 MYL1P05976 194 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 OR52Z1P0C646 297 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 MAP3K10Q02779 954 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 SYDE2Q5VT97 1194 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 RASSF8Q8NHQ8 419 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 PCDHA1Q9Y5I3 950 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 MYH7BA7E2Y1 1941 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 STX10O60499 249 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 PAK1Q13153 545 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 ORC2Q13416 577 aaPredicted RBP16.97■□□□□ 0.31
TRIM3-215ENST00000639856 TNFAIP1Q13829 316 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 FAM83BQ5T0W9 1011 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 BAG1Q99933 345 aaPredicted RBP16.97■□□□□ 0.31
TRIM3-215ENST00000639856 PSTPIP2Q9H939 334 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 KBTBD4Q9NVX7 518 aa16.97■□□□□ 0.31
TRIM3-215ENST00000639856 DICER1Q9UPY3 1922 aaKnown RBP16.97■□□□□ 0.31
TRIM3-215ENST00000639856 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.31
TRIM3-215ENST00000639856 TEX33O43247 280 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms