RNA–Protein interactions for RNA: ENST00000638903.1

PAX6-243, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-243ENST00000638903 BRIP1Q9BX63 1249 aa12.93□□□□□ -0.34
PAX6-243ENST00000638903 ARHGAP20Q9P2F6 1191 aa12.93□□□□□ -0.34
PAX6-243ENST00000638903 ZBTB1Q9Y2K1 713 aa12.93□□□□□ -0.34
PAX6-243ENST00000638903 COL5A2P05997 1499 aaPredicted RBP12.93□□□□□ -0.34
PAX6-243ENST00000638903 HNRNPH3P31942 346 aaKnown RBP12.92□□□□□ -0.34
PAX6-243ENST00000638903 KIF11P52732 1056 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 PDCLQ13371 301 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 FKBP15Q5T1M5 1219 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 RASGRP4Q8TDF6 673 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 CCSER1Q9C0I3 900 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 SMARCAL1Q9NZC9 954 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 CYP19A1P11511 503 aaPredicted RBP12.92□□□□□ -0.34
PAX6-243ENST00000638903 TNFRSF8P28908 595 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 USP8P40818 1118 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 PAFAH1B1P43034 410 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 MNAT1P51948 309 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 DYNLL1P63167 89 aaKnown RBP12.92□□□□□ -0.34
PAX6-243ENST00000638903 C8orf74Q6P047 294 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 ZIM3Q96PE6 472 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 TMEM60Q9H2L4 133 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 EHD2Q9NZN4 543 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 NHSL1Q5SYE7 1610 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 CACNA1SQ13698 1873 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 CICQ96RK0 1608 aaPredicted RBP12.92□□□□□ -0.34
PAX6-243ENST00000638903 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 KRT14P02533 472 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 PDE4DQ08499 809 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 CCDC91Q7Z6B0 441 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
PAX6-243ENST00000638903 LRRC15Q8TF66 581 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 IQCDQ96DY2 449 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 PCDHA4Q9UN74 947 aa12.92□□□□□ -0.34
PAX6-243ENST00000638903 ATXN2Q99700 1313 aaKnown RBP12.91□□□□□ -0.34
PAX6-243ENST00000638903 CCDC194A0A1B0GVG4 234 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 USP17L12C9JPN9 530 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 USP17L21D6R901 530 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 NKRFO15226 690 aaKnown RBP eCLIP12.91□□□□□ -0.34
PAX6-243ENST00000638903 AKR1B10O60218 316 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 LCA5LO95447 670 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 STK4Q13043 487 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 NNTQ13423 1086 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 KCTD16Q68DU8 428 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 CNPY4Q8N129 248 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 SH2D3CQ8N5H7 860 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
PAX6-243ENST00000638903 CCDC47Q96A33 483 aaKnown RBP12.91□□□□□ -0.34
PAX6-243ENST00000638903 RBM12Q9NTZ6 932 aaKnown RBP12.91□□□□□ -0.34
PAX6-243ENST00000638903 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 SLIT2O94813 1529 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 EIF4A3P38919 411 aaKnown RBP12.91□□□□□ -0.34
PAX6-243ENST00000638903 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
PAX6-243ENST00000638903 ATP1A2P50993 1020 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 FAM47AQ5JRC9 791 aa12.91□□□□□ -0.34
PAX6-243ENST00000638903 PRPF38AQ8NAV1 312 aaKnown RBP12.91□□□□□ -0.34
PAX6-243ENST00000638903 ITGB4P16144 1822 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 LOC102724159A0A0B4J2E5 919 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 NCK2O43639 380 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 EVX2Q03828 476 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 CHRNDQ07001 517 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.34
PAX6-243ENST00000638903 GLE1Q53GS7 698 aaKnown RBP12.9□□□□□ -0.34
PAX6-243ENST00000638903 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 TRIM9Q9C026 710 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 FAM207AQ9NSI2 230 aaPredicted RBP12.9□□□□□ -0.34
PAX6-243ENST00000638903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.9□□□□□ -0.34
PAX6-243ENST00000638903 CAPN7Q9Y6W3 813 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 RREB1Q92766 1687 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 DCCP43146 1447 aa12.9□□□□□ -0.34
PAX6-243ENST00000638903 EPHB6O15197 1021 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 ZEB2O60315 1214 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 FCER1AP12319 257 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 PLCG1P19174 1290 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 KIF5BP33176 963 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 SUSD4Q5VX71 490 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 SPATS2Q86XZ4 545 aaKnown RBP12.9□□□□□ -0.35
PAX6-243ENST00000638903 OTUD6BQ8N6M0 293 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 TLR10Q9BXR5 811 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 CUEDC2Q9H467 287 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 SH3GLB2Q9NR46 395 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 SALL4Q9UJQ4 1053 aa12.9□□□□□ -0.35
PAX6-243ENST00000638903 M0R2N6 131 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
PAX6-243ENST00000638903 ORC4O43929 436 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 PPP1R2P41236 205 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 MAGEA1P43355 309 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 ASIC1P78348 528 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 INF2Q27J81 1249 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 CFAP58Q5T655 872 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 IFT20Q8IY31 132 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 IQCKQ8N0W5 287 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 GPATCH11Q8N954 259 aa12.89□□□□□ -0.35
PAX6-243ENST00000638903 CCDC43Q96MW1 224 aaKnown RBP12.89□□□□□ -0.35
PAX6-243ENST00000638903 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms