RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 OSBPL7Q9BZF2 842 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.46□□□□□ -0.25
GFAP-228ENST00000638488 GSG1L2A8MUP6 293 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 DNM1LO00429 736 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 ENC1O14682 589 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
GFAP-228ENST00000638488 ZPR1O75312 459 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 NDUFA10O95299 355 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 PEX19P40855 299 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 SCTRP47872 440 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 RIPK1Q13546 671 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 NSMCE1Q8WV22 266 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 CAPZA3Q96KX2 299 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 ZIM3Q96PE6 472 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 SETDB2Q96T68 719 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 NOD2Q9HC29 1040 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 CCNL1Q9UK58 526 aaPredicted RBP13.45□□□□□ -0.26
GFAP-228ENST00000638488 C15orf41Q9Y2V0 281 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 REXO2Q9Y3B8 237 aaKnown RBP13.45□□□□□ -0.26
GFAP-228ENST00000638488 EPN1Q9Y6I3 576 aaPredicted RBP13.45□□□□□ -0.26
GFAP-228ENST00000638488 BCL9LQ86UU0 1499 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 MINDY4BA8MYZ0 360 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 HMGB1P1B2RPK0 211 aaPredicted RBP13.45□□□□□ -0.26
GFAP-228ENST00000638488 SH2B2O14492 632 aaPredicted RBP13.45□□□□□ -0.26
GFAP-228ENST00000638488 IFIT3O14879 490 aaKnown RBP13.45□□□□□ -0.26
GFAP-228ENST00000638488 SSBP05455 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
GFAP-228ENST00000638488 ADGRA1Q86SQ6 560 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 ARFGAP2Q8N6H7 521 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 ZSWIM5Q9P217 1185 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 JAG2Q9Y219 1238 aa13.45□□□□□ -0.26
GFAP-228ENST00000638488 SRGAP2O75044 1071 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 SH2D3CQ8N5H7 860 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 TRIM58Q8NG06 486 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 THOC1Q96FV9 657 aaKnown RBP13.44□□□□□ -0.26
GFAP-228ENST00000638488 PSMD1Q99460 953 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 MINPP1Q9UNW1 487 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 E7EVH7 732 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 CAND2O75155 1236 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 KLRK1P26718 216 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 ACCSLQ4AC99 568 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 KANK3Q6NY19 840 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 APOA5Q6Q788 366 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 MFSD6Q6ZSS7 791 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 MFN1Q8IWA4 741 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 IQCKQ8N0W5 287 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 CCDC82Q8N4S0 544 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 SPATA20Q8TB22 786 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 NACAP1Q9BZK3 213 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
GFAP-228ENST00000638488 GOLGA8AA7E2F4 631 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 SMIM22K7EJ46 135 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 PDE2AO00408 941 aaPredicted RBP13.43□□□□□ -0.26
GFAP-228ENST00000638488 ZBTB43O43298 467 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 SEC24CP53992 1094 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 ELF3P78545 371 aaPredicted RBP13.43□□□□□ -0.26
GFAP-228ENST00000638488 C2orf54Q08AI8 447 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 MREGQ8N565 214 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 KDM4CQ9H3R0 1056 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 SYNRGQ9UMZ2 1314 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 C5orf60A6NFR6 353 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 UBE2Q2LH0YL09 131 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 FOXN1O15353 648 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
GFAP-228ENST00000638488 ATP6V1G3Q96LB4 118 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 NLRP3Q96P20 1036 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 ALG1Q9BT22 464 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 ARAP2Q8WZ64 1704 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 KRT86O43790 486 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 RTN3O95197 1032 aaPredicted RBP13.43□□□□□ -0.26
GFAP-228ENST00000638488 DYNLL1P63167 89 aaKnown RBP13.43□□□□□ -0.26
GFAP-228ENST00000638488 MYO1EQ12965 1108 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 CCDC122Q5T0U0 273 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 CFAP58Q5T655 872 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 IGDCC4Q8TDY8 1250 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 LY9Q9HBG7 655 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 STIM2Q9P246 746 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 TRIM10Q9UDY6 481 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
GFAP-228ENST00000638488 RTCBQ9Y3I0 505 aaKnown RBP13.43□□□□□ -0.26
GFAP-228ENST00000638488 SLC12A7Q9Y666 1083 aa13.43□□□□□ -0.26
GFAP-228ENST00000638488 RREB1Q92766 1687 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 MAGEB6P1A0A0J9YX57 407 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 GMNCA6NCL1 334 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 ENO4A6NNW6 628 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 KRT83P78385 493 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
GFAP-228ENST00000638488 KCTD16Q68DU8 428 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 CMTR1Q8N1G2 835 aaKnown RBP13.42□□□□□ -0.26
GFAP-228ENST00000638488 KRI1Q8N9T8 703 aaKnown RBP13.42□□□□□ -0.26
GFAP-228ENST00000638488 TMEM87BQ96K49 555 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 NUP58Q9BVL2 599 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms