RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 RNF20Q5VTR2 975 aa14.58□□□□□ -0.08
GFAP-227ENST00000638400 SLC39A5Q6ZMH5 540 aa14.58□□□□□ -0.08
GFAP-227ENST00000638400 FBXO16Q8IX29 292 aaPredicted RBP14.58□□□□□ -0.08
GFAP-227ENST00000638400 SNX21Q969T3 373 aa14.58□□□□□ -0.08
GFAP-227ENST00000638400 MPHOSPH6Q99547 160 aaKnown RBP14.58□□□□□ -0.08
GFAP-227ENST00000638400 UPF3AQ9H1J1 476 aaKnown RBP14.58□□□□□ -0.08
GFAP-227ENST00000638400 SENP2Q9HC62 589 aa14.58□□□□□ -0.08
GFAP-227ENST00000638400 RBM27Q9P2N5 1060 aaKnown RBP14.58□□□□□ -0.08
GFAP-227ENST00000638400 ATP11BQ9Y2G3 1177 aa14.58□□□□□ -0.08
GFAP-227ENST00000638400 DDX49Q9Y6V7 483 aaKnown RBP14.58□□□□□ -0.08
GFAP-227ENST00000638400 TRIOBPQ9H2D6 2365 aa14.58□□□□□ -0.08
GFAP-227ENST00000638400 MOXD2PA6NHM9 499 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 ZBTB5O15062 677 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 DDAH1O94760 285 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 C6orf222P0C671 652 aaPredicted RBP14.57□□□□□ -0.08
GFAP-227ENST00000638400 ACLYP53396 1101 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 GJA9P57773 515 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 TNFAIP2Q03169 654 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 TROAPQ12815 778 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 C1orf53Q5VUE5 145 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 NOL8Q76FK4 1167 aaKnown RBP14.57□□□□□ -0.08
GFAP-227ENST00000638400 EEPD1Q7L9B9 569 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 MCF2L2Q86YR7 1114 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 KLHDC9Q8NEP7 349 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 DNERQ8NFT8 737 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 TMEM87BQ96K49 555 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 AMNQ9BXJ7 453 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 LY9Q9HBG7 655 aa14.57□□□□□ -0.08
GFAP-227ENST00000638400 MRPL11Q9Y3B7 192 aaKnown RBP14.57□□□□□ -0.08
GFAP-227ENST00000638400 A0A1W2PPC1 479 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 MYADML2A6NDP7 307 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 B4DLN1 442 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 SH2B2O14492 632 aaPredicted RBP14.56□□□□□ -0.08
GFAP-227ENST00000638400 MAGEA10P43363 369 aaPredicted RBP14.56□□□□□ -0.08
GFAP-227ENST00000638400 MRPL12P52815 198 aaKnown RBP14.56□□□□□ -0.08
GFAP-227ENST00000638400 PDE4DQ08499 809 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 TRAF1Q13077 416 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 TRIM60Q495X7 471 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 CCSAPQ6IQ19 270 aaPredicted RBP14.56□□□□□ -0.08
GFAP-227ENST00000638400 TAPT1Q6NXT6 567 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 PCSK9Q8NBP7 692 aaKnown RBP14.56□□□□□ -0.08
GFAP-227ENST00000638400 NUP133Q8WUM0 1156 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 MTMR8Q96EF0 704 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 GDF15Q99988 308 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 PRKAG2Q9UGJ0 569 aa14.56□□□□□ -0.08
GFAP-227ENST00000638400 ZNFX1Q9P2E3 1918 aaKnown RBP14.56□□□□□ -0.08
GFAP-227ENST00000638400 ALPK3Q96L96 1907 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.55□□□□□ -0.08
GFAP-227ENST00000638400 SMPD1P17405 629 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 EDNRBP24530 442 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 KIF5BP33176 963 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 NKX3-2P78367 333 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 KCNA10Q16322 511 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 GNASQ5JWF2 1037 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 IQSEC1Q6DN90 963 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 TLK2Q86UE8 772 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 HOMER1Q86YM7 354 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 TMTC2Q8N394 836 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 CTCFLQ8NI51 663 aaPredicted RBP14.55□□□□□ -0.08
GFAP-227ENST00000638400 SYTL5Q8TDW5 730 aaPredicted RBP14.55□□□□□ -0.08
GFAP-227ENST00000638400 MAP3K14Q99558 947 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 AP5M1Q9H0R1 490 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 RIOX1Q9H6W3 641 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 GPHNQ9NQX3 736 aaPredicted RBP14.55□□□□□ -0.08
GFAP-227ENST00000638400 STARD7Q9NQZ5 370 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 PDGFCQ9NRA1 345 aa14.55□□□□□ -0.08
GFAP-227ENST00000638400 GNEQ9Y223 722 aaKnown RBP14.55□□□□□ -0.08
GFAP-227ENST00000638400 CCDC69A6NI79 296 aa14.54□□□□□ -0.08
GFAP-227ENST00000638400 PPP1R11O60927 126 aaPredicted RBP14.54□□□□□ -0.08
GFAP-227ENST00000638400 BMP8BP34820 402 aa14.54□□□□□ -0.08
GFAP-227ENST00000638400 FXR1P51114 621 aaKnown RBP eCLIP14.54□□□□□ -0.08
GFAP-227ENST00000638400 SLC35G1Q2M3R5 365 aa14.54□□□□□ -0.08
GFAP-227ENST00000638400 GLT1D1Q96MS3 346 aa14.54□□□□□ -0.08
GFAP-227ENST00000638400 PIGSQ96S52 555 aa14.54□□□□□ -0.08
GFAP-227ENST00000638400 PCDHA1Q9Y5I3 950 aa14.54□□□□□ -0.08
GFAP-227ENST00000638400 LRRC37A2A6NM11 1700 aa14.54□□□□□ -0.08
GFAP-227ENST00000638400 ELP1O95163 1332 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 RBM47A0AV96 593 aaKnown RBP14.53□□□□□ -0.08
GFAP-227ENST00000638400 CTAGE5O15320 804 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 ASGR1P07306 291 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 LIFRP42702 1097 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 IRX5P78411 483 aaPredicted RBP14.53□□□□□ -0.08
GFAP-227ENST00000638400 GHRHRQ02643 423 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 TLE2Q04725 743 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 KRT32Q14532 448 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 FSCN1Q16658 493 aaKnown RBP14.53□□□□□ -0.08
GFAP-227ENST00000638400 DUSP28Q4G0W2 176 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 NSUN6Q8TEA1 469 aaKnown RBP14.53□□□□□ -0.08
GFAP-227ENST00000638400 SCFD2Q8WU76 684 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 TBC1D5Q92609 795 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 LBHD1Q9BQE6 289 aaPredicted RBP14.53□□□□□ -0.08
GFAP-227ENST00000638400 MYL10Q9BUA6 226 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 WDR11Q9BZH6 1224 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 PRDM5Q9NQX1 630 aaPredicted RBP14.53□□□□□ -0.08
GFAP-227ENST00000638400 PDLIM7Q9NR12 457 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 CHMP5Q9NZZ3 219 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms