RNA–Protein interactions for RNA: ENST00000638086.1

GRAMD1B-215, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-215ENST00000638086 GOLGA6L9A6NEM1 432 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 SNHG28P0DPA3 235 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 ATP1A3P13637 1013 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 LIG3P49916 1009 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 OXER1Q8TDS5 423 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 PNKPQ96T60 521 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 LZTS2Q9BRK4 669 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 SPZ1Q9BXG8 430 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 FAM107BQ9H098 131 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 KIAA1468Q9P260 1216 aa14.2□□□□□ -0.14
GRAMD1B-215ENST00000638086 TCP10L2B9ZVM9 353 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 FZD9O00144 591 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 PDHBP11177 359 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 VEGFAP15692 232 aaPredicted RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 XBP1P17861 261 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 HNRNPH1P31943 449 aaKnown RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 ZNF280AP59817 542 aaPredicted RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 SHROOM1Q2M3G4 852 aaPredicted RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 ANO1Q5XXA6 986 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 LRRC47Q8N1G4 583 aaKnown RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 FAM151AQ8WW52 585 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 PUF60Q9UHX1 559 aaKnown RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 RAB21Q9UL25 225 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 MTMR7Q9Y216 660 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 PARP1P09874 1014 aaKnown RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 GOLGA8HP0CJ92 632 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 RPS12P25398 132 aaKnown RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 NR5A1Q13285 461 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 CASP8Q14790 479 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 USP17L2Q6R6M4 530 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 SRGAP1Q7Z6B7 1085 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 FMR1NBQ8N0W7 255 aaPredicted RBP14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 CSRNP1Q96S65 589 aa14.19□□□□□ -0.14
GRAMD1B-215ENST00000638086 USP17L5A8MUK1 530 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 KLRF2D3W0D1 207 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 WNT10BO00744 389 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 USP8P40818 1118 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 EIF6P56537 245 aaKnown RBP14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 UBASH3AP57075 661 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 PTPN21Q16825 1174 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 CERKLQ49MI3 558 aaPredicted RBP14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 TMEM139Q8IV31 216 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 DPF2Q92785 391 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 MYOZ2Q9NPC6 264 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 MPHOSPH10O00566 681 aaKnown RBP14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 CUTAO60888 179 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 SMARCA1P28370 1054 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 KCNV1Q6PIU1 500 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 KCNG4Q8TDN1 519 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 TNFRSF25Q93038 417 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 ATAD5Q96QE3 1844 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 A0A1B0GVL5 298 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 SERPINC1P01008 464 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 TOB1P50616 345 aaPredicted RBP14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 PTPAQ15257 358 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 FBXW10Q5XX13 1052 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 FAM83AQ86UY5 434 aa14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 HERC5Q9UII4 1024 aaKnown RBP14.18□□□□□ -0.14
GRAMD1B-215ENST00000638086 KRT2P35908 639 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 KARSQ15046 597 aaKnown RBP14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 STK38Q15208 465 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 NBPF9Q3BBW0 867 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 MSANTD4Q8NCY6 345 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 CPVLQ9H3G5 476 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 SH3GLB2Q9NR46 395 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 PGAP2Q9UHJ9 254 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 PCDHA7Q9UN72 937 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 CCDC189A1A4V9 331 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 SPTLC2O15270 562 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 SLC39A14Q15043 492 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 SF3A1Q15459 793 aaKnown RBP14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 ASPRV1Q53RT3 343 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 TOGARAM2Q6ZUX3 1019 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 TMEM179Q6ZVK1 233 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 AFAP1L1Q8TED9 768 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 ACBD3Q9H3P7 528 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 VEZTQ9HBM0 779 aa14.17□□□□□ -0.14
GRAMD1B-215ENST00000638086 ZNF541Q9H0D2 1346 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 CBFA2T2O43439 604 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 EGFRP00533 1210 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 GMPSP49915 693 aaPredicted RBP14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 NDUFA8P51970 172 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 NLRP12P59046 1061 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 JAG1P78504 1218 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 TYW1BQ6NUM6 668 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 SIAH1Q8IUQ4 282 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 CDAN1Q8IWY9 1227 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 GPKOWQ92917 476 aaPredicted RBP eCLIP14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 MKL1Q969V6 931 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 BAG1Q99933 345 aaPredicted RBP14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 KANSL2Q9H9L4 492 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 NYAP2Q9P242 653 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 TMEM232C9JQI7 657 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 MYO1BO43795 1136 aa14.16□□□□□ -0.14
GRAMD1B-215ENST00000638086 RNF40O75150 1001 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms