RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CST5P28325 142 aaPredicted RBP20.69■□□□□ 0.9
PNKP-230ENST00000638016 TLK2Q86UE8 772 aa20.69■□□□□ 0.9
PNKP-230ENST00000638016 TSEN34Q9BSV6 310 aaKnown RBP20.69■□□□□ 0.9
PNKP-230ENST00000638016 STARD7Q9NQZ5 370 aa20.69■□□□□ 0.9
PNKP-230ENST00000638016 COL20A1Q9P218 1284 aa20.69■□□□□ 0.9
PNKP-230ENST00000638016 KLRF2D3W0D1 207 aa20.68■□□□□ 0.9
PNKP-230ENST00000638016 GNASQ5JWF2 1037 aa20.68■□□□□ 0.9
PNKP-230ENST00000638016 C1orf53Q5VUE5 145 aa20.68■□□□□ 0.9
PNKP-230ENST00000638016 A0A1W2PPC1 479 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 PALM3A6NDB9 673 aaPredicted RBP20.67■□□□□ 0.9
PNKP-230ENST00000638016 MOXD2PA6NHM9 499 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 SLC27A2O14975 620 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 DYNC1LI2O43237 492 aaPredicted RBP20.67■□□□□ 0.9
PNKP-230ENST00000638016 GRM4Q14833 912 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 WTAPQ15007 396 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 BMP2KLQ5H9B9 411 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 TDHQ8IZJ6 230 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 BADQ92934 168 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 MYL10Q9BUA6 226 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 VTA1Q9NP79 307 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 ANO2Q9NQ90 1003 aa20.67■□□□□ 0.9
PNKP-230ENST00000638016 ADD3Q9UEY8 706 aaKnown RBP20.67■□□□□ 0.9
PNKP-230ENST00000638016 OPLAHO14841 1288 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 TMEM67Q5HYA8 995 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 CXCL17Q6UXB2 119 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 FBXO11Q86XK2 927 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 HOMER1Q86YM7 354 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 IGDCC4Q8TDY8 1250 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 TAAR1Q96RJ0 339 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 LBHD1Q9BQE6 289 aaPredicted RBP20.66■□□□□ 0.9
PNKP-230ENST00000638016 SPC25Q9HBM1 224 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 PRKAG2Q9UGJ0 569 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 ABCB11O95342 1321 aa20.66■□□□□ 0.9
PNKP-230ENST00000638016 CYTH3O43739 400 aa20.65■□□□□ 0.9
PNKP-230ENST00000638016 CLTBP09497 229 aa20.65■□□□□ 0.9
PNKP-230ENST00000638016 EDNRBP24530 442 aa20.65■□□□□ 0.9
PNKP-230ENST00000638016 TROAPQ12815 778 aa20.65■□□□□ 0.9
PNKP-230ENST00000638016 SYTL5Q8TDW5 730 aaPredicted RBP20.65■□□□□ 0.9
PNKP-230ENST00000638016 MTMR8Q96EF0 704 aa20.65■□□□□ 0.9
PNKP-230ENST00000638016 GLT1D1Q96MS3 346 aa20.65■□□□□ 0.9
PNKP-230ENST00000638016 PNMA2Q9UL42 364 aa20.65■□□□□ 0.9
PNKP-230ENST00000638016 ERICH2A1L162 156 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 NKX3-2P78367 333 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 FAAP100Q0VG06 881 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 FSCN1Q16658 493 aaKnown RBP20.64■□□□□ 0.89
PNKP-230ENST00000638016 CREB3L3Q68CJ9 461 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 IQSEC1Q6DN90 963 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 PCSK9Q8NBP7 692 aaKnown RBP20.64■□□□□ 0.89
PNKP-230ENST00000638016 NUP133Q8WUM0 1156 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 PIBF1Q8WXW3 757 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 COPS5Q92905 334 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 VTI1AQ96AJ9 217 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 PIGSQ96S52 555 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 LRRC2Q9BYS8 371 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 WDR11Q9BZH6 1224 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 LY9Q9HBG7 655 aa20.64■□□□□ 0.89
PNKP-230ENST00000638016 PRC1O43663 620 aa20.63■□□□□ 0.89
PNKP-230ENST00000638016 ARIH2O95376 493 aa20.63■□□□□ 0.89
PNKP-230ENST00000638016 PSMC6P62333 389 aa20.63■□□□□ 0.89
PNKP-230ENST00000638016 PDE4DQ08499 809 aa20.63■□□□□ 0.89
PNKP-230ENST00000638016 NECTIN1Q15223 517 aa20.63■□□□□ 0.89
PNKP-230ENST00000638016 C9orf50Q5SZB4 431 aa20.63■□□□□ 0.89
PNKP-230ENST00000638016 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
PNKP-230ENST00000638016 AP5M1Q9H0R1 490 aa20.63■□□□□ 0.89
PNKP-230ENST00000638016 ZBTB5O15062 677 aa20.62■□□□□ 0.89
PNKP-230ENST00000638016 CFBP00751 764 aa20.62■□□□□ 0.89
PNKP-230ENST00000638016 RXRAP19793 462 aa20.62■□□□□ 0.89
PNKP-230ENST00000638016 SART3Q15020 963 aaKnown RBP20.62■□□□□ 0.89
PNKP-230ENST00000638016 DUSP28Q4G0W2 176 aa20.62■□□□□ 0.89
PNKP-230ENST00000638016 ANKRD33Q7Z3H0 272 aa20.62■□□□□ 0.89
PNKP-230ENST00000638016 DNERQ8NFT8 737 aa20.62■□□□□ 0.89
PNKP-230ENST00000638016 PPP1R13LQ8WUF5 828 aa20.62■□□□□ 0.89
PNKP-230ENST00000638016 AMNQ9BXJ7 453 aa20.62■□□□□ 0.89
PNKP-230ENST00000638016 LAMA2P24043 3122 aaKnown RBP20.61■□□□□ 0.89
PNKP-230ENST00000638016 GRIN2DO15399 1336 aa20.61■□□□□ 0.89
PNKP-230ENST00000638016 ELP1O95163 1332 aa20.61■□□□□ 0.89
PNKP-230ENST00000638016 RBM47A0AV96 593 aaKnown RBP20.61■□□□□ 0.89
PNKP-230ENST00000638016 SH2B2O14492 632 aaPredicted RBP20.61■□□□□ 0.89
PNKP-230ENST00000638016 EIF2AK2P19525 551 aaKnown RBP20.61■□□□□ 0.89
PNKP-230ENST00000638016 CDK7P50613 346 aa20.61■□□□□ 0.89
PNKP-230ENST00000638016 EPHB4P54760 987 aa20.61■□□□□ 0.89
PNKP-230ENST00000638016 ZNF654Q8IZM8 581 aa20.61■□□□□ 0.89
PNKP-230ENST00000638016 RGS22Q8NE09 1264 aa20.61■□□□□ 0.89
PNKP-230ENST00000638016 RIOX1Q9H6W3 641 aa20.61■□□□□ 0.89
PNKP-230ENST00000638016 TMEM39AQ9NV64 488 aa20.61■□□□□ 0.89
PNKP-230ENST00000638016 MRPL11Q9Y3B7 192 aaKnown RBP20.61■□□□□ 0.89
PNKP-230ENST00000638016 A0A0U1RQG5 324 aaPredicted RBP20.6■□□□□ 0.89
PNKP-230ENST00000638016 ARVCFO00192 962 aa20.6■□□□□ 0.89
PNKP-230ENST00000638016 KIAA0355O15063 1070 aa20.6■□□□□ 0.89
PNKP-230ENST00000638016 HOXA13P31271 388 aaPredicted RBP20.6■□□□□ 0.89
PNKP-230ENST00000638016 SHHQ15465 462 aa20.6■□□□□ 0.89
PNKP-230ENST00000638016 CATIPQ7Z7H3 387 aa20.6■□□□□ 0.89
PNKP-230ENST00000638016 FAM126BQ8IXS8 530 aa20.6■□□□□ 0.89
PNKP-230ENST00000638016 PCDHA1Q9Y5I3 950 aa20.6■□□□□ 0.89
PNKP-230ENST00000638016 KIAA1217Q5T5P2 1943 aa20.6■□□□□ 0.89
PNKP-230ENST00000638016 LOC102724159A0A0B4J2E5 919 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 PPP2R5BQ15173 497 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 PWP2Q15269 919 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms