RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 SYDE2Q5VT97 1194 aa14.33□□□□□ -0.12
CACNA1A-250ENST00000637809 CLEC4DQ8WXI8 215 aa14.33□□□□□ -0.12
CACNA1A-250ENST00000637809 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
CACNA1A-250ENST00000637809 TMEM47Q9BQJ4 181 aa14.33□□□□□ -0.12
CACNA1A-250ENST00000637809 NKX2-4Q9H2Z4 354 aa14.33□□□□□ -0.12
CACNA1A-250ENST00000637809 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
CACNA1A-250ENST00000637809 TRANK1O15050 2925 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 LOC102724159A0A0B4J2E5 919 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 FGAP02671 866 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 TOP1P11387 765 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 PWP2Q15269 919 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 SLC30A10Q6XR72 485 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 PPM1EQ8WY54 764 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 WDR11Q9BZH6 1224 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 MTIF3Q9H2K0 278 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 HELLSQ9NRZ9 838 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 TCP11L1Q9NUJ3 509 aa14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 TRMT13Q9NUP7 481 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 FRMPD2Q68DX3 1309 aaPredicted RBP14.32□□□□□ -0.12
CACNA1A-250ENST00000637809 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 PDHBP11177 359 aa14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 EDNRBP24530 442 aa14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 RABGGTBP53611 331 aa14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 PDE1AP54750 535 aa14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 PURAQ00577 322 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 ATXN2LQ8WWM7 1075 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 SCLYQ96I15 445 aa14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 GPCPD1Q9NPB8 672 aa14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 ADD3Q9UEY8 706 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-250ENST00000637809 PTPDC1A2A3K4 754 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 SNHG28P0DPA3 235 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 HSPD1P10809 573 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 CYP2C9P11712 490 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 MYOGP15173 224 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 MCMDC2Q4G0Z9 681 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 RRP12Q5JTH9 1297 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 ANKRD45Q5TZF3 282 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 ZNF589Q86UQ0 364 aaPredicted RBP14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 RPUSD2Q8IZ73 545 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 ASB2Q96Q27 587 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 SLC4A7Q9Y6M7 1214 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 TNKSO95271 1327 aa14.3□□□□□ -0.12
CACNA1A-250ENST00000637809 TNFRSF10AO00220 468 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 SUPT20HL2P0C7V6 817 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 IGFBP4P22692 258 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 CALML3P27482 149 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 CPT1AP50416 773 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 ZNF543Q08ER8 600 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 TTLL4Q14679 1199 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 CCDC85BQ15834 202 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 TICAM2Q86XR7 235 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 OR6J1Q8NGC5 347 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 MTG1Q9BT17 334 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 THEGQ9P2T0 379 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 PCDHA11Q9Y5I1 949 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 ZMYM6O95789 1325 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 LCTP09848 1927 aa14.29□□□□□ -0.12
CACNA1A-250ENST00000637809 PFKMP08237 780 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 MYL3P08590 195 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 ATP2A2P16615 1042 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 HAND2P61296 217 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 RPS6P62753 249 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 NBPF20Q3BBV1 942 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 RNF207Q6ZRF8 634 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 TBC1D10CQ8IV04 446 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 WDR19Q8NEZ3 1342 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 COPS5Q92905 334 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 BDP1A6H8Y1 2624 aa14.28□□□□□ -0.12
CACNA1A-250ENST00000637809 A6NJR5 290 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 ZBBXA8MT70 800 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 NMIQ13287 307 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 PPP2R5BQ15173 497 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 PPP2R2DQ66LE6 453 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 NFRKBQ6P4R8 1299 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 DNERQ8NFT8 737 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 SCFD2Q8WU76 684 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 PPP1R13LQ8WUF5 828 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 TTC14Q96N46 770 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 PNMA2Q9UL42 364 aa14.27□□□□□ -0.13
CACNA1A-250ENST00000637809 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 ARIH2O95376 493 aa14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 PCP11498 1178 aaKnown RBP14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 MRPS5P82675 430 aaKnown RBP14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 PDE4DQ08499 809 aa14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 DEFB128Q7Z7B8 93 aa14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 ADAMTS19Q8TE59 1207 aa14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 CRBNQ96SW2 442 aa14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-250ENST00000637809 NEDD4P46934 1319 aa14.25□□□□□ -0.13
CACNA1A-250ENST00000637809 CCDC171Q6TFL3 1326 aa14.25□□□□□ -0.13
CACNA1A-250ENST00000637809 PITPNM1O00562 1244 aa14.25□□□□□ -0.13
CACNA1A-250ENST00000637809 KPNA6O60684 536 aa14.25□□□□□ -0.13
CACNA1A-250ENST00000637809 IQCF3P0C7M6 154 aa14.25□□□□□ -0.13
CACNA1A-250ENST00000637809 GOLGA8HP0CJ92 632 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms