RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 TCHPQ9BT92 498 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 LMBRD1Q9NUN5 540 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 POLLQ9UGP5 575 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 RCOR1Q9UKL0 485 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 CYP2D7A0A087X1C5 515 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 PSMD14O00487 310 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 CETN3O15182 167 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 KIF5CO60282 957 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 ADCY5O95622 1261 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 EPB41P11171 864 aaKnown RBP6.16□□□□□ -1.42
CHD2-227ENST00000637572 CYLC1P35663 651 aaPredicted RBP6.16□□□□□ -1.42
CHD2-227ENST00000637572 SOX10P56693 466 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 NLRP12P59046 1061 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 CHMP4BP1P59074 171 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 DDR1Q08345 913 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 STRN3Q13033 797 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 TKFCQ3LXA3 575 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 TMEM259Q4ZIN3 620 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 HS1BP3Q53T59 392 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.16□□□□□ -1.42
CHD2-227ENST00000637572 CEP95Q96GE4 821 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 SPAG5Q96R06 1193 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 PIGSQ96S52 555 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 PAGR1Q9BTK6 254 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 HOMER2Q9NSB8 354 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 STK17AQ9UEE5 414 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 STX10O60499 249 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 CCND2P30279 289 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 LRP10Q7Z4F1 713 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 FAM83AQ86UY5 434 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 NCAPG2Q86XI2 1143 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 GIMAP8Q8ND71 665 aaPredicted RBP6.16□□□□□ -1.42
CHD2-227ENST00000637572 PPP1R12CQ9BZL4 782 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 DNAJC25Q9H1X3 360 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 MYOZ2Q9NPC6 264 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 NRBP2Q9NSY0 501 aa6.16□□□□□ -1.42
CHD2-227ENST00000637572 SEPT11Q9NVA2 429 aaKnown RBP6.16□□□□□ -1.42
CHD2-227ENST00000637572 WDR46O15213 610 aaKnown RBP6.15□□□□□ -1.42
CHD2-227ENST00000637572 ERLIN2O94905 339 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 RASA3Q14644 834 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 DEFB115Q30KQ5 88 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 PRR16Q569H4 304 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 CCDC181Q5TID7 509 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 KCTD1Q719H9 257 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 AOPEPQ8N6M6 819 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 GIPC2Q8TF65 315 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 DPF2Q92785 391 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 GPKOWQ92917 476 aaPredicted RBP eCLIP6.15□□□□□ -1.421e-6■■□□□ 13.8
CHD2-227ENST00000637572 VTI1AQ96AJ9 217 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 MLXIPQ9HAP2 919 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 LRRC4BQ9NT99 713 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 MTMR4Q9NYA4 1195 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 LARSQ9P2J5 1176 aaKnown RBP6.15□□□□□ -1.42
CHD2-227ENST00000637572 F5H6K3 240 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 POTEB2H3BUK9 544 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 CTNND1O60716 968 aaKnown RBP6.15□□□□□ -1.42
CHD2-227ENST00000637572 OATP04181 439 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 CYP2D6P10635 497 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 EEF2P13639 858 aaKnown RBP6.15□□□□□ -1.42
CHD2-227ENST00000637572 KLRC3Q07444 240 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 PAK1Q13153 545 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 VWA3BQ502W6 1294 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 TDRD12Q587J7 1177 aaKnown RBP6.15□□□□□ -1.42
CHD2-227ENST00000637572 MIGA2Q7L4E1 593 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 TMC6Q7Z403 805 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 SAMD3Q8N6K7 520 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 VGLL2Q8N8G2 317 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 ADAMTS19Q8TE59 1207 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 SYNPO2Q9UMS6 1093 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 COL4A3BPQ9Y5P4 624 aa6.15□□□□□ -1.42
CHD2-227ENST00000637572 PHLPP2Q6ZVD8 1323 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 hCG_1642624A0A1W2PR95 340 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L15C9J2P7 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L13C9JLJ4 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L11C9JVI0 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L18D6R9N7 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L22D6RA61 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L17D6RBQ6 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L19D6RCP7 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L20D6RJB6 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 SLC26A4O43511 780 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 PHACTR2O75167 634 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 MAP2K1Q02750 393 aaPredicted RBP6.15□□□□□ -1.43
CHD2-227ENST00000637572 USP17L24Q0WX57 530 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 HERC4Q5GLZ8 1057 aaPredicted RBP6.15□□□□□ -1.43
CHD2-227ENST00000637572 CHRDL2Q6WN34 429 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 CYB5R4Q7L1T6 521 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 HACE1Q8IYU2 909 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 ALS2CR12Q96Q35 445 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 GSDMAQ96QA5 445 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 NUP58Q9BVL2 599 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 BCL2L12Q9HB09 334 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 STRCQ7RTU9 1775 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 PHRF1Q9P1Y6 1649 aaKnown RBP6.15□□□□□ -1.43
CHD2-227ENST00000637572 ESPNB1AK53 854 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 CHMP2AO43633 222 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 PFKFB1P16118 471 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 LIG1P18858 919 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 GMPSP49915 693 aaPredicted RBP6.15□□□□□ -1.43
CHD2-227ENST00000637572 CNGA4Q8IV77 575 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms