RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 GJA5P36382 358 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 TM4SF4P48230 202 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 HMGCS2P54868 508 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 ATP2B2Q01814 1243 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 BECN1Q14457 450 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 RTN1Q16799 776 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 NOM1Q5C9Z4 860 aaKnown RBP7.8□□□□□ -1.16
UPF3B-205ENST00000636792 DLK2Q6UY11 383 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 MICU3Q86XE3 530 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 HSCBQ8IWL3 235 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 PRPF38AQ8NAV1 312 aaKnown RBP7.8□□□□□ -1.16
UPF3B-205ENST00000636792 FANCBQ8NB91 859 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 ACER1Q8TDN7 264 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 GTF3C6Q969F1 213 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 INTS4Q96HW7 963 aaKnown RBP7.8□□□□□ -1.16
UPF3B-205ENST00000636792 PARK7Q99497 189 aaKnown RBP7.8□□□□□ -1.16
UPF3B-205ENST00000636792 RNF26Q9BY78 433 aaPredicted RBP7.8□□□□□ -1.16
UPF3B-205ENST00000636792 SLKQ9H2G2 1235 aaPredicted RBP7.8□□□□□ -1.16
UPF3B-205ENST00000636792 HOXC10Q9NYD6 342 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 FZD1Q9UP38 647 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 WASF2Q9Y6W5 498 aa7.8□□□□□ -1.16
UPF3B-205ENST00000636792 CASP8AP2Q9UKL3 1982 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 CCL15-CCL14A0A0B4J2E2 113 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 LOC100996750A0A140TA64 210 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 KLRF2D3W0D1 207 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 K7ELQ4 463 aaPredicted RBP7.79□□□□□ -1.16
UPF3B-205ENST00000636792 CPLX1O14810 134 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 ATP2A1O14983 1001 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 ANP32AP39687 249 aaKnown RBP7.79□□□□□ -1.16
UPF3B-205ENST00000636792 GCLCP48506 637 aaPredicted RBP7.79□□□□□ -1.16
UPF3B-205ENST00000636792 USP46P62068 366 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 IRX3P78415 501 aaPredicted RBP7.79□□□□□ -1.16
UPF3B-205ENST00000636792 HMGN5P82970 282 aaKnown RBP7.79□□□□□ -1.16
UPF3B-205ENST00000636792 APOBRQ0VD83 1088 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 MOGSQ13724 837 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 COG2Q14746 738 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 CCL15Q16663 113 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 CCDC96Q2M329 555 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 SHROOM1Q2M3G4 852 aaPredicted RBP7.79□□□□□ -1.16
UPF3B-205ENST00000636792 CATSPERGQ6ZRH7 1159 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 TMTC3Q6ZXV5 915 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 CHST3Q7LGC8 479 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 CLEC10AQ8IUN9 316 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 TRIM22Q8IYM9 498 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 SAMD3Q8N6K7 520 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 WASF1Q92558 559 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 CAPNS2Q96L46 248 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 TCEANC2Q96MN5 208 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 PHOX2BQ99453 314 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 SLF1Q9BQI6 1058 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 RPAP3Q9H6T3 665 aaPredicted RBP7.79□□□□□ -1.16
UPF3B-205ENST00000636792 RIOX1Q9H6W3 641 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 SAGE1Q9NXZ1 904 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 MAD2L2Q9UI95 211 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 PPP1R9AQ9ULJ8 1098 aa7.79□□□□□ -1.16
UPF3B-205ENST00000636792 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.79□□□□□ -1.16
UPF3B-205ENST00000636792 WDR33Q9C0J8 1336 aaKnown RBP7.78□□□□□ -1.16
UPF3B-205ENST00000636792 H3BM21 787 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 GPR37O15354 613 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 FLOT1O75955 427 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 BMP1P13497 986 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 CPA1P15085 419 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 CUL4AQ13619 759 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 FAM110CQ1W6H9 321 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 TKFCQ3LXA3 575 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 FAM83BQ5T0W9 1011 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 SYDE2Q5VT97 1194 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 GADL1Q6ZQY3 521 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.78□□□□□ -1.16
UPF3B-205ENST00000636792 EHBP1Q8NDI1 1231 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 NUP133Q8WUM0 1156 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 BRI3BPQ8WY22 251 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 MTMR8Q96EF0 704 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 LRRC2Q9BYS8 371 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 TANGO6Q9C0B7 1094 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 GLT8D2Q9H1C3 349 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 RANBP17Q9H2T7 1088 aaKnown RBP7.78□□□□□ -1.16
UPF3B-205ENST00000636792 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.78□□□□□ -1.16
UPF3B-205ENST00000636792 SEC63Q9UGP8 760 aaKnown RBP7.78□□□□□ -1.16
UPF3B-205ENST00000636792 BRPF3Q9ULD4 1205 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 TPCN1Q9ULQ1 816 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 ADAMTS5Q9UNA0 930 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 MGAMO43451 1857 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 CNTNAP5Q8WYK1 1306 aa7.78□□□□□ -1.16
UPF3B-205ENST00000636792 BTBD19C9JJ37 291 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 TMEM232C9JQI7 657 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 DEXIO95424 95 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 CD46P15529 392 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 XBP1P17861 261 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 VEGFBP49765 207 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 HERVK_113P62684 666 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 MAP2K1Q02750 393 aaPredicted RBP7.77□□□□□ -1.17
UPF3B-205ENST00000636792 SCRN1Q12765 414 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 IKQ13123 557 aaPredicted RBP7.77□□□□□ -1.17
UPF3B-205ENST00000636792 COL9A3Q14050 684 aaPredicted RBP7.77□□□□□ -1.17
UPF3B-205ENST00000636792 ZYXQ15942 572 aaKnown RBP7.77□□□□□ -1.17
UPF3B-205ENST00000636792 ME3Q16798 604 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 MCTP2Q6DN12 878 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 CYP4F22Q6NT55 531 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms