RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TTC19Q6DKK2 380 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 CLEC4GQ6UXB4 293 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 DGKHQ86XP1 1220 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 FAM204AQ9H8W3 233 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 CAPN11Q9UMQ6 739 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 TULP1O00294 542 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 ZNF263O14978 683 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 NONOQ15233 471 aaKnown RBP eCLIP15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 UBE2SQ16763 222 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 CT47A1Q5JQC4 288 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 TAF3Q5VWG9 929 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 TEX11Q8IYF3 940 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 KIAA0895Q8NCT3 520 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 ZHX3Q9H4I2 956 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 HAUS4Q9H6D7 363 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 DOT1LQ8TEK3 1739 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 KRT86O43790 486 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 RHOBTB3O94955 611 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 TNNI2P48788 182 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 CDK8P49336 464 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 DNM2P50570 870 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 RRAGAQ7L523 313 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 DNAAF5Q86Y56 855 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 COG1Q8WTW3 980 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 CDK5RAP3Q96JB5 506 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 DNAJC7Q99615 494 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 SEMA6BQ9H3T3 888 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 RAB21Q9UL25 225 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 CAPN6Q9Y6Q1 641 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 SLC37A4O43826 429 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 MARCH6O60337 910 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 EIF3JO75822 258 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 SLC16A2P36021 539 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 TRIM14Q14142 442 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 TRAPPC11Q7Z392 1133 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 EEF1GP26641 437 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 ARHGEF1Q92888 912 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 RSPH14Q9UHP6 348 aa15.65■□□□□ 0.1
CACNA1A-228ENST00000636610 M0R2N6 131 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 AKR1B10O60218 316 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 SRGNP10124 158 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 PCP11498 1178 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 SBK1Q52WX2 424 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 NFRKBQ6P4R8 1299 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 MMTAG2Q9BU76 263 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 ANKRD2Q9GZV1 360 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 ABCA3Q99758 1704 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 MYMKA6NI61 221 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 RIMBP2O15034 1052 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 RNF40O75150 1001 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 BAG3O95817 575 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 CCNE1P24864 410 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 CYLC1P35663 651 aaPredicted RBP15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 KIF5AQ12840 1032 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 SPA17Q15506 151 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 MIIPQ5JXC2 388 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 KCNK18Q7Z418 384 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 NEK8Q86SG6 692 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 THAP9Q9H5L6 903 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 FLT1P17948 1338 aa15.64■□□□□ 0.09
CACNA1A-228ENST00000636610 UFL1O94874 794 aa15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 EIF4A3P38919 411 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 TDRD12Q587J7 1177 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 LEKR1Q6ZMV7 388 aa15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 RRP36Q96EU6 259 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 PYM1Q9BRP8 204 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 IFIH1Q9BYX4 1025 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 MKRN1Q9UHC7 482 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 PALM3A6NDB9 673 aaPredicted RBP15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 FECHP22830 423 aa15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 TM4SF1P30408 202 aa15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 USP14P54578 494 aa15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 KRT83P78385 493 aa15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 SMARCC1Q92922 1105 aaPredicted RBP15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 C6orf50Q9HD87 102 aa15.63■□□□□ 0.09
CACNA1A-228ENST00000636610 POTEB2H3BUK9 544 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 GFPT1Q06210 699 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 SPTY2D1Q68D10 685 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 REXO1Q8N1G1 1221 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 SECISBP2LQ93073 1101 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 CCDC47Q96A33 483 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 CALML4Q96GE6 196 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 MXD3Q9BW11 206 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 ARHGAP20Q9P2F6 1191 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 GGCXP38435 758 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 GNAQP50148 359 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 HNRNPLLQ8WVV9 542 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 BBXQ8WY36 941 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 CCSER1Q9C0I3 900 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 DMGDHQ9UI17 866 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 CCNL1Q9UK58 526 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 MYH10P35580 1976 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 PLCH1Q4KWH8 1693 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 LRRC53A6NM62 1247 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 PSMD14O00487 310 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 RASSF7Q02833 373 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms