RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 IFT172Q9UG01 1749 aa3.35□□□□□ -1.87
CD46-219ENST00000636114 SHISA3A0PJX4 238 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 SHOXO15266 292 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 KLF4O43474 513 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 ADAMTS4O75173 837 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 CD8BP10966 210 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 TPP2P29144 1249 aaPredicted RBP3.34□□□□□ -1.87
CD46-219ENST00000636114 PPP2R1AP30153 589 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 CD96P40200 585 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 BNIP3Q12983 259 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 NBPF6Q5VWK0 638 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 HEATR6Q6AI08 1181 aaKnown RBP3.34□□□□□ -1.87
CD46-219ENST00000636114 RICTORQ6R327 1708 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 C6orf15Q6UXA7 325 aaPredicted RBP3.34□□□□□ -1.87
CD46-219ENST00000636114 ZNF574Q6ZN55 896 aaPredicted RBP3.34□□□□□ -1.87
CD46-219ENST00000636114 TMC3Q7Z5M5 1100 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 SPRED2Q7Z698 418 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 WFDC3Q8IUB2 231 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 AGBL5Q8NDL9 886 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.34□□□□□ -1.87
CD46-219ENST00000636114 SYTL5Q8TDW5 730 aaPredicted RBP3.34□□□□□ -1.87
CD46-219ENST00000636114 KLHL6Q8WZ60 621 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 NBPF4Q96M43 638 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 TRIM55Q9BYV6 548 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 PNNQ9H307 717 aaKnown RBP3.34□□□□□ -1.87
CD46-219ENST00000636114 PAK6Q9NQU5 681 aaPredicted RBP3.34□□□□□ -1.87
CD46-219ENST00000636114 PPP1R1BQ9UD71 204 aaPredicted RBP3.34□□□□□ -1.87
CD46-219ENST00000636114 FBXL21Q9UKT6 434 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 DIP2CQ9Y2E4 1556 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 CAMSAP1Q5T5Y3 1602 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 ABCA6Q8N139 1617 aa3.34□□□□□ -1.87
CD46-219ENST00000636114 BLMP54132 1417 aaPredicted RBP3.34□□□□□ -1.88
CD46-219ENST00000636114 CBFA2T2O43439 604 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 PRAMEF1O95521 474 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 NAT2P11245 290 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 ITGA4P13612 1032 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 CD247P20963 164 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 IDI1Q13907 227 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 RAB33AQ14088 237 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 TCEAL1Q15170 157 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 KIAA1211LQ6NV74 962 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 TP53INP2Q8IXH6 220 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 FAM178BQ8IXR5 827 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 ZNF655Q8N720 491 aaPredicted RBP3.34□□□□□ -1.88
CD46-219ENST00000636114 DAGLBQ8NCG7 672 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 CFAP53Q96M91 514 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 HDAC8Q9BY41 377 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 KLHL25Q9H0H3 589 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 GBP3Q9H0R5 595 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 GP6Q9HCN6 339 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 LMCD1Q9NZU5 365 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 WHRNQ9P202 907 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 DUSP13Q9UII6 198 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 RCAN3Q9UKA8 241 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 PIK3C2BO00750 1634 aa3.34□□□□□ -1.88
CD46-219ENST00000636114 CGNL1Q0VF96 1302 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 POLR3AO14802 1390 aaPredicted RBP3.33□□□□□ -1.88
CD46-219ENST00000636114 ANKRD34BA5PLL1 514 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 U2SURPO15042 1029 aaKnown RBP3.33□□□□□ -1.88
CD46-219ENST00000636114 DDAH1O94760 285 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 EPHX1P07099 455 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 FUT4P22083 530 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 LTKP29376 864 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 ZNF143P52747 638 aaPredicted RBP3.33□□□□□ -1.88
CD46-219ENST00000636114 CNGB1Q14028 1251 aaPredicted RBP3.33□□□□□ -1.88
CD46-219ENST00000636114 DDR2Q16832 855 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 NOL9Q5SY16 702 aaKnown RBP3.33□□□□□ -1.88
CD46-219ENST00000636114 SOGA3Q5TF21 947 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 CREG2Q8IUH2 290 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 DHX38Q92620 1227 aaKnown RBP3.33□□□□□ -1.88
CD46-219ENST00000636114 CCDC136Q96JN2 1154 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 DRC1Q96MC2 740 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 DSCC1Q9BVC3 393 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 CHST7Q9NS84 486 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 GFOD1Q9NXC2 390 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 ZNF451Q9Y4E5 1061 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 FHOD1Q9Y613 1164 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 ERVK-7P63135 1459 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 PPLO60437 1756 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 UGGT1Q9NYU2 1555 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
CD46-219ENST00000636114 A0A087WZG4 1122 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 WASH4PA8MWX3 477 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 B2RBV5 119 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 PPM1BO75688 479 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 GJB6O95452 261 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 ESR1P03372 595 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 GP2P55259 537 aaKnown RBP3.32□□□□□ -1.88
CD46-219ENST00000636114 ZNF445P59923 1031 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 ZP2Q05996 745 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 RBL2Q08999 1139 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 PLCL1Q15111 1095 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 NBPF11Q86T75 865 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 CELF2-AS1Q8N7Q2 184 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 MICAL1Q8TDZ2 1067 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 UBXN4Q92575 508 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 TCTN2Q96GX1 697 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 CARS2Q9HA77 564 aaKnown RBP3.32□□□□□ -1.88
CD46-219ENST00000636114 TERF2IPQ9NYB0 399 aa3.32□□□□□ -1.88
CD46-219ENST00000636114 PCDHA11Q9Y5I1 949 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 1540.5 ms