RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GPKOWQ92917 476 aaPredicted RBP eCLIP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 MAP3K20Q9NYL2 800 aaKnown RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 KCND2Q9NZV8 630 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 EXOC7Q9UPT5 735 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 PITPNM2Q9BZ72 1349 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 SCP2P22307 547 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 ZNF543Q08ER8 600 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 SMAP1Q8IYB5 467 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 GIMAP8Q8ND71 665 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CEP95Q96GE4 821 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 FAM81BQ96LP2 452 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 MAF1Q9H063 256 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 LGALS16A8MUM7 142 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 TOB1P50616 345 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 USP14P54578 494 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 SETQ01105 290 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 FUT2Q10981 343 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 NCAPHQ15003 741 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 ADGRA1Q86SQ6 560 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 RUBCNQ92622 972 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 ZHX3Q9H4I2 956 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 NUP188Q5SRE5 1749 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CYP2D7A0A087X1C5 515 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 A0A0G2JLW4 131 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 A0A1W2PQJ5 194 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 F8W031 263 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 EPB41P11171 864 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 KRT13P13646 458 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 ZNF18P17022 549 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 RDXP35241 583 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CRKP46108 304 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 NR1I3Q14994 352 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 PPP2R5EQ16537 467 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CCDC144BQ3MJ40 725 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 FKBP1CQ5VVH2 108 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 DCAF15Q66K64 600 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 ZDHHC15Q96MV8 337 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 TUBGCP2Q9BSJ2 902 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 PPIP5K2O43314 1243 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 N4BP1O75113 896 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 SRGNP10124 158 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 NIM1KQ8IY84 436 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 DYNLL2Q96FJ2 89 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 SEL1LQ9UBV2 794 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 NRBP1Q9UHY1 535 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CDC23Q9UJX2 597 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 PCDHB13Q9Y5F0 798 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 GCOM1H8Y6P7 765 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 POLR2MP0CAP2 368 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 POTEJP0CG39 1038 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 TCP1P17987 556 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 KARSQ15046 597 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 TDRD12Q587J7 1177 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 GJB4Q9NTQ9 266 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 BIN2Q9UBW5 565 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 MAD2L2Q9UI95 211 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 RGPD2P0DJD1 1756 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CYP2D6P10635 497 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CDK17Q00537 523 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 UTP14CQ5TAP6 766 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CDKAL1Q5VV42 579 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 LARGE2Q8N3Y3 721 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 PLVAPQ9BX97 442 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 KCNF1Q9H3M0 494 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 L2HGDHQ9H9P8 463 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 KBTBD4Q9NVX7 518 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 ADD3Q9UEY8 706 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 TRAF5O00463 557 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 MMP10P09238 476 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 TBC1D5Q92609 795 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 VPS16Q9H269 839 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 EPN1Q9Y6I3 576 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 FAM13AO94988 1023 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 MDM2Q00987 491 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CCDC122Q5T0U0 273 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 SECISBP2LQ93073 1101 aaKnown RBP5.06□□□□□ -1.6
SCN1A-210ENST00000635776 CRACR2AQ9BSW2 395 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 ANO3Q9BYT9 981 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 SENP2Q9HC62 589 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 TAB2Q9NYJ8 693 aa5.06□□□□□ -1.6
SCN1A-210ENST00000635776 KMT5BQ4FZB7 885 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 TRMT44Q8IYL2 757 aaKnown RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 TIPINQ9BVW5 301 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 AK9Q5TCS8 1911 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 TECP42680 631 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 PPP1R2P3Q6NXS1 205 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 MB21D1Q8N884 522 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 GMCL1P1Q8NEA9 526 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 MKL1Q969V6 931 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 LARSQ9P2J5 1176 aaKnown RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 CCDC151A5D8V7 595 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 POLRMTO00411 1230 aaKnown RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 HERC4Q5GLZ8 1057 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 C10orf71Q711Q0 1435 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 RAD54LQ92698 747 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 GMCL1Q96IK5 515 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 TRIM9Q9C026 710 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 SAMSN1Q9NSI8 373 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms