RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SYNGAP1Q96PV0 1343 aa11.27□□□□□ -0.61
LINC00339-210ENST00000635675 LCTP09848 1927 aa11.27□□□□□ -0.61
LINC00339-210ENST00000635675 SGPL1O95470 568 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 CYBAP13498 195 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 GJA8P48165 433 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 RBM25P49756 843 aaKnown RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 GHRHRQ02643 423 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 PRAMEF19Q5SWL8 479 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 MCF2L2Q86YR7 1114 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 U2AF1L4Q8WU68 220 aaKnown RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 DEFB118Q96PH6 123 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 KIF2CQ99661 725 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 C22orf23Q9BZE7 217 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 CRISPLD2Q9H0B8 497 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 SEC63Q9UGP8 760 aaKnown RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 NRBP1Q9UHY1 535 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 hCG_1642624A0A1W2PR95 340 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 CALML3P27482 149 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 RGS19P49795 217 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 NEK4P51957 841 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 NTRK3Q16288 839 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 LHX8Q68G74 356 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 ARMCX2Q7L311 632 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 SAMD3Q8N6K7 520 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 SYTL5Q8TDW5 730 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 MORC4Q8TE76 937 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 MAP3K20Q9NYL2 800 aaKnown RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 COL20A1Q9P218 1284 aa11.26□□□□□ -0.61
LINC00339-210ENST00000635675 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 V9GY48 417 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-210ENST00000635675 CNTNAP5Q8WYK1 1306 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 MCM3APO60318 1980 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 LOC102724159A0A0B4J2E5 919 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 ASB14A6NK59 587 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 SEPT4O43236 478 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 ZNF865P0CJ78 1059 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-210ENST00000635675 HSD17B4P51659 736 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 AK2P54819 239 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 PWP2Q15269 919 aaKnown RBP11.25□□□□□ -0.61
LINC00339-210ENST00000635675 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 SHISA4Q96DD7 197 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 KATNBL1Q9H079 304 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 NCOA5Q9HCD5 579 aaKnown RBP11.25□□□□□ -0.61
LINC00339-210ENST00000635675 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-210ENST00000635675 TPCN1Q9ULQ1 816 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 CNPY2Q9Y2B0 182 aa11.25□□□□□ -0.61
LINC00339-210ENST00000635675 PRPF3O43395 683 aaKnown RBP11.24□□□□□ -0.61
LINC00339-210ENST00000635675 CFBP00751 764 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 IFNAR1P17181 557 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 CAPN2P17655 700 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 CNGA1P29973 690 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 ALDH5A1P51649 535 aaPredicted RBP11.24□□□□□ -0.61
LINC00339-210ENST00000635675 CCT2P78371 535 aaKnown RBP11.24□□□□□ -0.61
LINC00339-210ENST00000635675 ACVR2BQ13705 512 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 TAAR1Q96RJ0 339 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 BACH2Q9BYV9 841 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 ABHD16BQ9H3Z7 469 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 DDX20Q9UHI6 824 aaKnown RBP11.24□□□□□ -0.61
LINC00339-210ENST00000635675 OGDHLQ9ULD0 1010 aa11.24□□□□□ -0.61
LINC00339-210ENST00000635675 DDX49Q9Y6V7 483 aaKnown RBP11.24□□□□□ -0.61
LINC00339-210ENST00000635675 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-210ENST00000635675 MSCO60682 206 aa11.23□□□□□ -0.61
LINC00339-210ENST00000635675 TFRCP02786 760 aaKnown RBP11.23□□□□□ -0.61
LINC00339-210ENST00000635675 POLR2MP0CAP2 368 aa11.23□□□□□ -0.61
LINC00339-210ENST00000635675 EDNRBP24530 442 aa11.23□□□□□ -0.61
LINC00339-210ENST00000635675 HOXA13P31271 388 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-210ENST00000635675 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.61
LINC00339-210ENST00000635675 RMDN3Q96TC7 470 aa11.23□□□□□ -0.61
LINC00339-210ENST00000635675 UPF2Q9HAU5 1272 aaKnown RBP11.23□□□□□ -0.61
LINC00339-210ENST00000635675 PIK3CDO00329 1044 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 MEIS2O14770 477 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 PFKFB2O60825 505 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 SCRN1Q12765 414 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 STK3Q13188 491 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 PKN1Q16512 942 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 PFKFB3Q16875 520 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-210ENST00000635675 WWC2Q6AWC2 1192 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 TYW1BQ6NUM6 668 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 HEATR3Q7Z4Q2 680 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
LINC00339-210ENST00000635675 PHKBQ93100 1093 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 IWS1Q96ST2 819 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 RNF26Q9BY78 433 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-210ENST00000635675 PSTPIP2Q9H939 334 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 BARHL2Q9NY43 387 aa11.22□□□□□ -0.61
LINC00339-210ENST00000635675 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
LINC00339-210ENST00000635675 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-210ENST00000635675 BRCA2P51587 3418 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 B4DLN1 442 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 STXBP3O00186 592 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 SCG2P13521 617 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 AKR1A1P14550 325 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-210ENST00000635675 MRPL12P52815 198 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms