RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CD3EP07766 207 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 ACRP10323 421 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 IFNGR1P15260 489 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 RPL13P26373 211 aaKnown RBP2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 L1CAMP32004 1257 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 ST13P50502 369 aaKnown RBP2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 FAM26FQ5R3K3 315 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 NOL9Q5SY16 702 aaKnown RBP2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 CDCP2Q5VXM1 449 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 TDRD10Q5VZ19 366 aaKnown RBP2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 GK5Q6ZS86 529 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 FAM196AQ6ZSG2 479 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 CIR1Q86X95 450 aaPredicted RBP2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 FAM26EQ8N5C1 309 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 LZTR1Q8N653 840 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 TXNDC5Q8NBS9 432 aaKnown RBP2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 RGS22Q8NE09 1264 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 IGDCC4Q8TDY8 1250 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 USP33Q8TEY7 942 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 CPA5Q8WXQ8 436 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 PEX11GQ96HA9 241 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 ZDHHC15Q96MV8 337 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 CNNM2Q9H8M5 875 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 PARP2Q9UGN5 583 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 SIT1Q9Y3P8 196 aa2.06□□□□□ -2.08
SMARCB1-209ENST00000635578 C9IYK1 514 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 NPIPB8E9PQR5 432 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 MUSKO15146 869 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 SHOXO15266 292 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 GPR42O15529 346 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 B4GALT3O60512 393 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 TBC1D8O95759 1140 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 CTSHP09668 335 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 CRKP46108 304 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 SELENOPP49908 381 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 CORO7P57737 925 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 ZNF445P59923 1031 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 TGFB2P61812 414 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 CLCQ05315 142 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 PDE4CQ08493 712 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 SLC9A5Q14940 896 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 SMN1Q16637 294 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 PRAMEF18Q5VWM3 479 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 DCAF15Q66K64 600 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 CD300LDQ6UXZ3 194 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 C7orf61Q8IZ16 206 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 FIBCD1Q8N539 461 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 LINC00482Q8N8I6 264 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 LCORQ96JN0 433 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 FCRL3Q96P31 734 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 SLC9A7Q96T83 725 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 C11orf84Q9BUA3 381 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 CD248Q9HCU0 757 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 GULP1Q9UBP9 304 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 NUDT5Q9UKK9 219 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 TCAF1Q9Y4C2 921 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 LTBP3Q9NS15 1303 aa2.05□□□□□ -2.08
SMARCB1-209ENST00000635578 ATE1O95260 518 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 BRD1O95696 1058 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 TP53P04637 393 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 CYP1A1P04798 512 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 NME1P15531 152 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 GARTP22102 1010 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 MCM4P33991 863 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 CCNFP41002 786 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 NOP2P46087 812 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 INHBEP58166 350 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 TRIM26Q12899 539 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 PWP1Q13610 501 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 PPP2R5DQ14738 602 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 SEZ6Q53EL9 994 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 EAPPQ56P03 285 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 WWC2Q6AWC2 1192 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 FBXL19Q6PCT2 694 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 USP31Q70CQ4 1352 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 PLEKHH3Q7Z736 793 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 KYQ8NBH2 561 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 CHFRQ96EP1 664 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 WWC2-AS2Q96NR7 200 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 PTPN18Q99952 460 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 NOL6Q9H6R4 1146 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 WDR26Q9H7D7 661 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 COPRSQ9NQ92 184 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 KBTBD4Q9NVX7 518 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 PRR13Q9NZ81 148 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 SUCOQ9UBS9 1254 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 IVNS1ABPQ9Y6Y0 642 aa2.04□□□□□ -2.08
SMARCB1-209ENST00000635578 WDR33Q9C0J8 1336 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 STXBP3O00186 592 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 PPP1R11O60927 126 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ZNF623O75123 536 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ZNF202O95125 648 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ZBTB7AO95365 584 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 FUCA1P04066 466 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 NTRK1P04629 796 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 STAT5AP42229 794 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ITGA1P56199 1179 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 DAB2P98082 770 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 XPCQ01831 940 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ABHD18Q0P651 414 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms