RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 CAPN15O75808 1086 aa17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 CDC27P30260 824 aa17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 FUT2Q10981 343 aa17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 C22orf23Q9BZE7 217 aa17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 CNPY2Q9Y2B0 182 aa17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 ASTN1O14525 1302 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 OPLAHO14841 1288 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 CALML3P27482 149 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 CCND3P30281 292 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 HSD17B4P51659 736 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 ARMCX2Q7L311 632 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 CCDC82Q8N4S0 544 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 DNERQ8NFT8 737 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 DEFB118Q96PH6 123 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 FRMPD3Q5JV73 1810 aa17.05■□□□□ 0.32
CDC42BPB-209ENST00000634889 LRRC37A2A6NM11 1700 aa17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 hCG_1984214I3L0E3 225 aa17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 SGPL1O95470 568 aa17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 ALDH5A1P51649 535 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 ZNF713Q8N859 430 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 TRPV1Q8NER1 839 aa17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 MORC4Q8TE76 937 aa17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 U2AF1L4Q8WU68 220 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 CRISPLD2Q9H0B8 497 aa17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 ABHD16BQ9H3Z7 469 aa17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-209ENST00000634889 B4DLN1 442 aa17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 SEPT4O43236 478 aa17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 SNAI1O95863 264 aaPredicted RBP17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 CFBP00751 764 aa17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 CNGA1P29973 690 aa17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 RGS19P49795 217 aa17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 NEK4P51957 841 aa17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 MRPL12P52815 198 aaKnown RBP17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 AK2P54819 239 aa17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 DDX20Q9UHI6 824 aaKnown RBP17.03■□□□□ 0.32
CDC42BPB-209ENST00000634889 MCM3APO60318 1980 aa17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 ZNF865P0CJ78 1059 aaPredicted RBP17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 EN2P19622 333 aaPredicted RBP17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 TEX2Q8IWB9 1127 aa17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 IL27Q8NEV9 243 aa17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 SYTL5Q8TDW5 730 aaPredicted RBP17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 TBC1D5Q92609 795 aa17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 SHISA4Q96DD7 197 aa17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 PURBQ96QR8 312 aaKnown RBP17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 KIF2CQ99661 725 aa17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 V9GY48 417 aaPredicted RBP17.02■□□□□ 0.32
CDC42BPB-209ENST00000634889 GCOM1H8Y6P7 765 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 POLR2MP0CAP2 368 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 AKR1A1P14550 325 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 IFNAR1P17181 557 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 EDNRBP24530 442 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 CCT2P78371 535 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 ACVR2BQ13705 512 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 NTRK3Q16288 839 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 PRAMEF19Q5SWL8 479 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 LHX8Q68G74 356 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 PPP1R18Q6NYC8 613 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 HEATR3Q7Z4Q2 680 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 ANKLE1Q8NAG6 615 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 NSUN6Q8TEA1 469 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 NCOA5Q9HCD5 579 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 OGDHLQ9ULD0 1010 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
CDC42BPB-209ENST00000634889 hCG_1642624A0A1W2PR95 340 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 PIK3CDO00329 1044 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 CPLX1O14810 134 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 PRPF3O43395 683 aaKnown RBP17■□□□□ 0.31
CDC42BPB-209ENST00000634889 TFRCP02786 760 aaKnown RBP17■□□□□ 0.31
CDC42BPB-209ENST00000634889 PFKFB3Q16875 520 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-209ENST00000634889 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 CPLX2Q6PUV4 134 aaKnown RBP17■□□□□ 0.31
CDC42BPB-209ENST00000634889 IWS1Q96ST2 819 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 RMDN3Q96TC7 470 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 LARP6Q9BRS8 491 aaKnown RBP17■□□□□ 0.31
CDC42BPB-209ENST00000634889 KATNBL1Q9H079 304 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 SLKQ9H2G2 1235 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-209ENST00000634889 VTA1Q9NP79 307 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 BARHL2Q9NY43 387 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 COL20A1Q9P218 1284 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 ZHX1Q9UKY1 873 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-209ENST00000634889 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
CDC42BPB-209ENST00000634889 KIAA0100Q14667 2235 aaKnown RBP16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 PFKFB2O60825 505 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 SCG2P13521 617 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 HOXA13P31271 388 aaPredicted RBP16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 AKAP17AQ02040 695 aaKnown RBP16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 PDE4DQ08499 809 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 STK3Q13188 491 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 TRIM22Q8IYM9 498 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 CUL5Q93034 780 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms