RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 ATL3Q6DD88 541 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 USP17L2Q6R6M4 530 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 GMCL1Q96IK5 515 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 COL25A1Q9BXS0 654 aaPredicted RBP11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 SH2D4AQ9H788 454 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 AS3MTQ9HBK9 375 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 SH3GLB2Q9NR46 395 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 A0A1W2PRG0 241 aa11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 IRX3P78415 501 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 PFKFB3Q16875 520 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 KRT40Q6A162 431 aa11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 LRRC47Q8N1G4 583 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 GPRC5AQ8NFJ5 357 aa11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 SOCS4Q8WXH5 440 aa11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
SMARCA2-228ENST00000634772 GOLGA6L22H0YM25 854 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 CYTH3O43739 400 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 PLA2G6O60733 806 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 PPFIA3O75145 1194 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 CNMDO75829 334 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 GOLGA8HP0CJ92 632 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 SCG2P13521 617 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 SLC1A4P43007 532 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 ERVK-9P63128 1117 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 ERVK-24P63145 666 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 RESTQ13127 1097 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 SAFBQ15424 915 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 FOXD4L5Q5VV16 416 aaPredicted RBP11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 BTNL9Q6UXG8 535 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 GPR142Q7Z601 462 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 CLEC10AQ8IUN9 316 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 FOXD4L4Q8WXT5 416 aaPredicted RBP11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 MTMR8Q96EF0 704 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 RRP36Q96EU6 259 aaKnown RBP11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 AIFM3Q96NN9 605 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 VCPKMTQ9H867 229 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 GOPCQ9HD26 462 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 FLRT1Q9NZU1 646 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 CNTNAP5Q8WYK1 1306 aa11.24□□□□□ -0.61
SMARCA2-228ENST00000634772 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 NDUFB10O96000 172 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 BMP3P12645 472 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 U2AF2P26368 475 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 MAPK4P31152 587 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 GALNT17Q6IS24 598 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 ACER1Q8TDN7 264 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 APBA2Q99767 749 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 PAGR1Q9BTK6 254 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 KIAA1683Q9H0B3 1180 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 FOXP1Q9H334 677 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 GPCPD1Q9NPB8 672 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 TMOD4Q9NZQ9 345 aa11.23□□□□□ -0.61
SMARCA2-228ENST00000634772 LAMA2P24043 3122 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 PNMA6FA0A0J9YX94 578 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 C19orf81C9J6K1 198 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 hCG_1984214I3L0E3 225 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 IGHA2P01877 340 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 MMP1P03956 469 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 CALML3P27482 149 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 RGS2P41220 211 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 GUCY1B3Q02153 619 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 MCTP1Q6DN14 999 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 TTBK2Q6IQ55 1244 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 PLEKHH3Q7Z736 793 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 TRMT44Q8IYL2 757 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 ADGRF4Q8IZF3 695 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 ZNF713Q8N859 430 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 GTF3C2Q8WUA4 911 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 CHURC1Q8WUH1 139 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 LPAR1Q92633 364 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 PHF20Q9BVI0 1012 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 JMJD4Q9H9V9 463 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 SPTBN5Q9NRC6 3674 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 GJB4Q9NTQ9 266 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 CFAP45Q9UL16 551 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 MTMR7Q9Y216 660 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 EYSQ5T1H1 3165 aa11.22□□□□□ -0.61
SMARCA2-228ENST00000634772 FRMPD2Q68DX3 1309 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-228ENST00000634772 USP14P54578 494 aa11.21□□□□□ -0.61
SMARCA2-228ENST00000634772 KRT85P78386 507 aa11.21□□□□□ -0.61
SMARCA2-228ENST00000634772 TRAF1Q13077 416 aa11.21□□□□□ -0.61
SMARCA2-228ENST00000634772 MAP2K5Q13163 448 aa11.21□□□□□ -0.61
SMARCA2-228ENST00000634772 CCDC96Q2M329 555 aa11.21□□□□□ -0.61
SMARCA2-228ENST00000634772 SKOR2Q2VWA4 1001 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-228ENST00000634772 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-228ENST00000634772 FERMT3Q86UX7 667 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms