RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 CHURC1Q8WUH1 139 aa15.26■□□□□ 0.03
LINC00339-206ENST00000634451 COPS5Q92905 334 aa15.26■□□□□ 0.03
LINC00339-206ENST00000634451 ASB2Q96Q27 587 aa15.26■□□□□ 0.03
LINC00339-206ENST00000634451 NACAP1Q9BZK3 213 aa15.26■□□□□ 0.03
LINC00339-206ENST00000634451 ALDH8A1Q9H2A2 487 aaPredicted RBP15.26■□□□□ 0.03
LINC00339-206ENST00000634451 ZNF287Q9HBT7 754 aa15.26■□□□□ 0.03
LINC00339-206ENST00000634451 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
LINC00339-206ENST00000634451 MSRAQ9UJ68 235 aa15.26■□□□□ 0.03
LINC00339-206ENST00000634451 SCN10AQ9Y5Y9 1956 aa15.25■□□□□ 0.03
LINC00339-206ENST00000634451 SALL3Q9BXA9 1300 aa15.25■□□□□ 0.03
LINC00339-206ENST00000634451 ZBBXA8MT70 800 aa15.25■□□□□ 0.03
LINC00339-206ENST00000634451 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
LINC00339-206ENST00000634451 ALDH5A1P51649 535 aaPredicted RBP15.25■□□□□ 0.03
LINC00339-206ENST00000634451 RAB30Q15771 203 aa15.25■□□□□ 0.03
LINC00339-206ENST00000634451 TKFCQ3LXA3 575 aa15.25■□□□□ 0.03
LINC00339-206ENST00000634451 MORC4Q8TE76 937 aa15.25■□□□□ 0.03
LINC00339-206ENST00000634451 RANBP17Q9H2T7 1088 aaKnown RBP15.25■□□□□ 0.03
LINC00339-206ENST00000634451 CHMP4BQ9H444 224 aaKnown RBP15.25■□□□□ 0.03
LINC00339-206ENST00000634451 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 PTPRSQ13332 1948 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 PLA2G6O60733 806 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 ICAM1P05362 532 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 MYL3P08590 195 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 PPP2R2DQ66LE6 453 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 IQSEC1Q6DN90 963 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 CLEC4DQ8WXI8 215 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 CPVLQ9H3G5 476 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 SLC28A3Q9HAS3 691 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 BRWD1Q9NSI6 2320 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 BDP1A6H8Y1 2624 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 XIRP2A4UGR9 3374 aa15.24■□□□□ 0.03
LINC00339-206ENST00000634451 TNKSO95271 1327 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 A0A0D9SFI3 127 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 PTPDC1A2A3K4 754 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 CABYRO75952 493 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 SLC3A2P08195 630 aaKnown RBP15.23■□□□□ 0.03
LINC00339-206ENST00000634451 FDX1P10109 184 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 MX1P20591 662 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 CALML3P27482 149 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 NOVP48745 357 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 KCNQ1P51787 676 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 PURAQ00577 322 aaKnown RBP15.23■□□□□ 0.03
LINC00339-206ENST00000634451 DUSP28Q4G0W2 176 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 RRP12Q5JTH9 1297 aaKnown RBP15.23■□□□□ 0.03
LINC00339-206ENST00000634451 SYDE2Q5VT97 1194 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 ATXN2LQ8WWM7 1075 aaKnown RBP15.23■□□□□ 0.03
LINC00339-206ENST00000634451 FAM227BQ96M60 508 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 TMEM47Q9BQJ4 181 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 WDR11Q9BZH6 1224 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 VTA1Q9NP79 307 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 TRIP12Q14669 1992 aaPredicted RBP15.23■□□□□ 0.03
LINC00339-206ENST00000634451 TANC1Q9C0D5 1861 aa15.23■□□□□ 0.03
LINC00339-206ENST00000634451 ARIH2O95376 493 aa15.22■□□□□ 0.03
LINC00339-206ENST00000634451 CA3P07451 260 aa15.22■□□□□ 0.03
LINC00339-206ENST00000634451 ATP2A2P16615 1042 aaKnown RBP15.22■□□□□ 0.03
LINC00339-206ENST00000634451 HAND2P61296 217 aa15.22■□□□□ 0.03
LINC00339-206ENST00000634451 TMCO2Q7Z6W1 182 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-206ENST00000634451 UHRF1Q96T88 793 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-206ENST00000634451 ZEB2O60315 1214 aa15.21■□□□□ 0.03
LINC00339-206ENST00000634451 MRPS5P82675 430 aaKnown RBP15.21■□□□□ 0.03
LINC00339-206ENST00000634451 NBPF20Q3BBV1 942 aa15.21■□□□□ 0.03
LINC00339-206ENST00000634451 FAM47CQ5HY64 1035 aa15.21■□□□□ 0.03
LINC00339-206ENST00000634451 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.03
LINC00339-206ENST00000634451 OR6J1Q8NGC5 347 aa15.21■□□□□ 0.03
LINC00339-206ENST00000634451 DCAF4Q8WV16 495 aa15.21■□□□□ 0.03
LINC00339-206ENST00000634451 TOMM22Q9NS69 142 aa15.21■□□□□ 0.03
LINC00339-206ENST00000634451 ANAPC4Q9UJX5 808 aa15.21■□□□□ 0.03
LINC00339-206ENST00000634451 Q9Y3F1 56 aa15.21■□□□□ 0.03
LINC00339-206ENST00000634451 ERC2O15083 957 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 ORC4O43929 436 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 FGRP09769 529 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 GOLGA8HP0CJ92 632 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 PDHBP11177 359 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 CHMP4BP1P59074 171 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 TCTN1Q2MV58 587 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 BTNL9Q6UXG8 535 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 TBC1D10CQ8IV04 446 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 TBC1D5Q92609 795 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 CTAGE1Q96RT6 745 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 MTIF3Q9H2K0 278 aaKnown RBP15.2■□□□□ 0.02
LINC00339-206ENST00000634451 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
LINC00339-206ENST00000634451 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
LINC00339-206ENST00000634451 TRANK1O15050 2925 aa15.19■□□□□ 0.02
LINC00339-206ENST00000634451 RBM47A0AV96 593 aaKnown RBP15.19■□□□□ 0.02
LINC00339-206ENST00000634451 FGAP02671 866 aa15.19■□□□□ 0.02
LINC00339-206ENST00000634451 BMP1P13497 986 aa15.19■□□□□ 0.02
LINC00339-206ENST00000634451 RPS6P62753 249 aaKnown RBP15.19■□□□□ 0.02
LINC00339-206ENST00000634451 GPNMBQ14956 572 aa15.19■□□□□ 0.02
LINC00339-206ENST00000634451 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
LINC00339-206ENST00000634451 EDNRBP24530 442 aa15.18■□□□□ 0.02
LINC00339-206ENST00000634451 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
LINC00339-206ENST00000634451 USH1GQ495M9 461 aa15.18■□□□□ 0.02
LINC00339-206ENST00000634451 RNF207Q6ZRF8 634 aa15.18■□□□□ 0.02
LINC00339-206ENST00000634451 RPUSD2Q8IZ73 545 aaKnown RBP15.18■□□□□ 0.02
LINC00339-206ENST00000634451 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
LINC00339-206ENST00000634451 MTG1Q9BT17 334 aaPredicted RBP15.18■□□□□ 0.02
LINC00339-206ENST00000634451 COL20A1Q9P218 1284 aa15.18■□□□□ 0.02
LINC00339-206ENST00000634451 MTCH2Q9Y6C9 303 aa15.18■□□□□ 0.02
LINC00339-206ENST00000634451 NEDD4P46934 1319 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms