RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 CALML4Q96GE6 196 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 NAP1L5Q96NT1 182 aaPredicted RBP6.27□□□□□ -1.41
NEK3-211ENST00000629912 CTAGE1Q96RT6 745 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 MMTAG2Q9BU76 263 aaKnown RBP6.27□□□□□ -1.41
NEK3-211ENST00000629912 RAB34Q9BZG1 259 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 LRRC27Q9C0I9 530 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 TMX1Q9H3N1 280 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 ARHGEF10LQ9HCE6 1279 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 STK17AQ9UEE5 414 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 LRWD1Q9UFC0 647 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 RWDD2AQ9UIY3 292 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 ZBTB12Q9Y330 459 aaPredicted RBP6.27□□□□□ -1.41
NEK3-211ENST00000629912 PCDHA1Q9Y5I3 950 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 CD2APQ9Y5K6 639 aa6.27□□□□□ -1.41
NEK3-211ENST00000629912 BRCA1P38398 1863 aaKnown RBP6.27□□□□□ -1.41
NEK3-211ENST00000629912 LTBP3Q9NS15 1303 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 A0A1B0GTH6 734 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 PVALEFA0A1B0GWK0 134 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 CLRN2A0PK11 232 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 PP2D1A8MPX8 630 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 TMEM232C9JQI7 657 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 PIK3CDO00329 1044 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 MEIS2O14770 477 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 TBX3O15119 743 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 GDF11O95390 407 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 TUBB4AP04350 444 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 TPM2P07951 284 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 CYP3A4P08684 503 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 SKILP12757 684 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 CASP1P29466 404 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 CDC25AP30304 524 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 CIITAP33076 1130 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 CAP2P40123 477 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 TXKP42681 527 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 TNNI2P48788 182 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 SPAG1Q07617 926 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 GRB10Q13322 594 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 CDC37Q16543 378 aaPredicted RBP6.26□□□□□ -1.41
NEK3-211ENST00000629912 SHROOM1Q2M3G4 852 aaPredicted RBP6.26□□□□□ -1.41
NEK3-211ENST00000629912 KMT5BQ4FZB7 885 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 HYIQ5T013 277 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 ARMCX5Q6P1M9 558 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 SV2BQ7L1I2 683 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 FAM160B2Q86V87 743 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 GIMAP8Q8ND71 665 aaPredicted RBP6.26□□□□□ -1.41
NEK3-211ENST00000629912 CCDC112Q8NEF3 446 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 JDP2Q8WYK2 163 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 STAMQ92783 540 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 HAS1Q92839 578 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 CCDC47Q96A33 483 aaKnown RBP6.26□□□□□ -1.41
NEK3-211ENST00000629912 DHTKD1Q96HY7 919 aaPredicted RBP6.26□□□□□ -1.41
NEK3-211ENST00000629912 PRIMPOLQ96LW4 560 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 PNMA5Q96PV4 448 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 DEFB129Q9H1M3 183 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 BLZF1Q9H2G9 400 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 TAOK3Q9H2K8 898 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 GOPCQ9HD26 462 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 MYOZ2Q9NPC6 264 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 SAMSN1Q9NSI8 373 aaKnown RBP6.26□□□□□ -1.41
NEK3-211ENST00000629912 LIMA1Q9UHB6 759 aaKnown RBP6.26□□□□□ -1.41
NEK3-211ENST00000629912 DDX25Q9UHL0 483 aaKnown RBP6.26□□□□□ -1.41
NEK3-211ENST00000629912 STK24Q9Y6E0 443 aa6.26□□□□□ -1.41
NEK3-211ENST00000629912 PSDA5PKW4 1024 aaPredicted RBP6.25□□□□□ -1.41
NEK3-211ENST00000629912 FZD9O00144 591 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 WNT10BO00744 389 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 SLC37A4O43826 429 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 NRDCO43847 1150 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 ZBTB7AO95365 584 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 TDP2O95551 362 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 ASNSP08243 561 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 PLCG1P19174 1290 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 SFPQP23246 707 aaKnown RBP eCLIP6.25□□□□□ -1.41
NEK3-211ENST00000629912 PBX1P40424 430 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 PRCPP42785 496 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 PAK1Q13153 545 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 PSMD2Q13200 908 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 STIM1Q13586 685 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 ARID5BQ14865 1188 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 UBE2SQ16763 222 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 Q4G0T1 1027 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 FILIP1LQ4L180 1135 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 TMEM119Q4V9L6 283 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 KRT79Q5XKE5 535 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 SPECC1LQ69YQ0 1117 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 FOXR2Q6PJQ5 311 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 SLFN12Q8IYM2 578 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 KCTD17Q8N5Z5 321 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 ACER1Q8TDN7 264 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 LRRC15Q8TF66 581 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 NOC3LQ8WTT2 800 aaKnown RBP6.25□□□□□ -1.41
NEK3-211ENST00000629912 FAM20AQ96MK3 541 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 SGIP1Q9BQI5 828 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 TRIM9Q9C026 710 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 SH2D4AQ9H788 454 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 VCPKMTQ9H867 229 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 KCNMB3Q9NPA1 279 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 BLOC1S4Q9NUP1 217 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 INTS13Q9NVM9 706 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 ADD3Q9UEY8 706 aaKnown RBP6.25□□□□□ -1.41
NEK3-211ENST00000629912 FEM1BQ9UK73 627 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms