RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 SEPT2Q15019 361 aa14.34□□□□□ -0.11
SYNGAP1-208ENST00000629380 DLGAP5Q15398 846 aa14.34□□□□□ -0.11
SYNGAP1-208ENST00000629380 MRPL50Q8N5N7 158 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-208ENST00000629380 DCPSQ96C86 337 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-208ENST00000629380 NFE2L3Q9Y4A8 694 aa14.34□□□□□ -0.11
SYNGAP1-208ENST00000629380 PLEKHG3A1L390 1219 aa14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 EEF1B2P24534 225 aaKnown RBP14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 TPH2Q8IWU9 490 aa14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 FGD4Q96M96 766 aa14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 CHEK2O96017 543 aa14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 CPP00450 1065 aa14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 CLTAP09496 248 aa14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 CHMLP26374 656 aa14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 ZSCAN26Q16670 478 aa14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 CDV3Q9UKY7 258 aaKnown RBP14.33□□□□□ -0.11
SYNGAP1-208ENST00000629380 XPOTO43592 962 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 FAM186BQ8IYM0 893 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 GIPC2Q8TF65 315 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 FGFR1OP2Q9NVK5 253 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 SLC8A2Q9UPR5 921 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 PARD3Q8TEW0 1356 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 ANKARQ7Z5J8 1434 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 KIF20BQ96Q89 1820 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 KCNK3O14649 394 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 PMLP29590 882 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 SAMD9LQ8IVG5 1584 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 ARPP21Q9UBL0 812 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 ARMCX3Q9UH62 379 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 DAAM1Q9Y4D1 1078 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 ERBB4Q15303 1308 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 TXKP42681 527 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 CYP2J2P51589 502 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 RAPH1Q70E73 1250 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 SMYD2Q9NRG4 433 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 GPC4O75487 556 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 MORC4Q8TE76 937 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 UPF3AQ9H1J1 476 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 FAM207AQ9NSI2 230 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 MMS19Q96T76 1030 aa14.33□□□□□ -0.12
SYNGAP1-208ENST00000629380 U2AF2P26368 475 aaKnown RBP eCLIP14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 DHX38Q92620 1227 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 MYH3P11055 1940 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 BFSP1Q12934 665 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 CEP85Q6P2H3 762 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 TMCO5AQ8N6Q1 288 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 UBN1Q9NPG3 1134 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 SCOCQ9UIL1 159 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 RXRAP19793 462 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 YWHAGP61981 247 aaKnown RBP eCLIP14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 ATG16L1Q676U5 607 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 MID2Q9UJV3 735 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 LCA5Q86VQ0 697 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 TAB2Q9NYJ8 693 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 NEUROG2Q9H2A3 272 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 PDE1BQ01064 536 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 CHURC1Q8WUH1 139 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 GIMAP4Q9NUV9 329 aa14.32□□□□□ -0.12
SYNGAP1-208ENST00000629380 FAM95CA0A1B0GW59 222 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 EYA2O00167 538 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 NOP14P78316 857 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 RASIP1Q5U651 963 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 ATP6V1E2Q96A05 226 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 METTL14Q9HCE5 456 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 OLA1Q9NTK5 396 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 B4E1Z4 1266 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 TLR3O15455 904 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 TRIM45Q9H8W5 580 aaPredicted RBP14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 CDC42BPGQ6DT37 1551 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 A0A1B0GW55 424 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 DUX4L2P0CJ85 424 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 DUX4L3P0CJ86 424 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 DUX4L4P0CJ87 422 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 DUX4L5P0CJ88 424 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 DUX4L6P0CJ89 424 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 DUX4L7P0CJ90 424 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 GNGT1P63211 74 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 MTX1Q13505 466 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 MYOCDQ8IZQ8 938 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 SLF1Q9BQI6 1058 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 DONSONQ9NYP3 566 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 DUX4Q9UBX2 424 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 H3BRJ5 948 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 ARHGEF18Q6ZSZ5 1173 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 TRIM59Q8IWR1 403 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 JARID2Q92833 1246 aaPredicted RBP14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 WDR17Q8IZU2 1322 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 EFCAB8A8MWE9 144 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 GPAA1O43292 621 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 SAT1P21673 171 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 KRT27Q7Z3Y8 459 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 PSMB7Q99436 277 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 NBPF3Q9H094 633 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 BLMP54132 1417 aaPredicted RBP14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 TMEM191BP0C7N4 346 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 NPR1P16066 1061 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 IL1RL1Q01638 556 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 C10orf76Q5T2E6 689 aa14.31□□□□□ -0.12
SYNGAP1-208ENST00000629380 USP26Q9BXU7 913 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms