RNA–Protein interactions for RNA: ENST00000629343.2

TCF4-267, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-267	ENST00000629343	RNF26	Q9BY78	433 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-267	ENST00000629343	CWC22	Q9HCG8	908 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-267	ENST00000629343	FOXD4L1	Q9NU39	408 aa		11.44	□□□□□ -0.58
TCF4-267	ENST00000629343	COL20A1	Q9P218	1284 aa		11.44	□□□□□ -0.58
TCF4-267	ENST00000629343	PARP14	Q460N5	1801 aa		11.44	□□□□□ -0.58
TCF4-267	ENST00000629343	POTEB2	H3BUK9	544 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	STXBP3	O00186	592 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	MEIS2	O14770	477 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	CAPN15	O75808	1086 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	SCG2	P13521	617 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	HSD17B4	P51659	736 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	SSRP1	Q08945	709 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	MAP3K21	Q5TCX8	1036 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	WWC2	Q6AWC2	1192 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	SLAIN1	Q8ND83	568 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	MORC4	Q8TE76	937 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	SH3TC2	Q8TF17	1288 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	APBA2	Q99767	749 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	TINF2	Q9BSI4	451 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	SLC26A6	Q9BXS9	759 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	BARHL2	Q9NY43	387 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	SLC5A4	Q9NY91	659 aa		11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	SEC63	Q9UGP8	760 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-267	ENST00000629343	PFAS	O15067	1338 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	PIK3CD	O00329	1044 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	CPLX1	O14810	134 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	ADAMTS3	O15072	1205 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	ST18	O60284	1047 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	CALML3	P27482	149 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	CYP2C19	P33261	490 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	MCM2	P49736	904 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	CACNB2	Q08289	660 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	PRAMEF19	Q5SWL8	479 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	MSL3	Q8N5Y2	521 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	NSUN7	Q8NE18	718 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	TRPV1	Q8NER1	839 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	TMX3	Q96JJ7	454 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	ZNF333	Q96JL9	665 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	PSTPIP2	Q9H939	334 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	RBM27	Q9P2N5	1060 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-267	ENST00000629343		A0A0G2JMZ2	1700 aa		11.42	□□□□□ -0.58
TCF4-267	ENST00000629343	PTPDC1	A2A3K4	754 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	SMCO2	A6NFE2	343 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	CFB	P00751	764 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	POLR2M	P0CAP2	368 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	HOXA13	P31271	388 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	MTFR1	Q15390	333 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	CPLX2	Q6PUV4	134 aa	Known RBP	11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	USP17L6P	Q6QN14	398 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	SLC30A10	Q6XR72	485 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	HEATR3	Q7Z4Q2	680 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	TEX2	Q8IWB9	1127 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	DNER	Q8NFT8	737 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	SMARCC2	Q8TAQ2	1214 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	AIFM3	Q96NN9	605 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	LLPH	Q9BRT6	129 aa	Known RBP	11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	KATNBL1	Q9H079	304 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	ZMYND12	Q9H0C1	365 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	SH3GLB2	Q9NR46	395 aa		11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	DDX49	Q9Y6V7	483 aa	Known RBP	11.41	□□□□□ -0.58
TCF4-267	ENST00000629343	ZSWIM8	A7E2V4	1837 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	LOC102724159	A0A0B4J2E5	919 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	hCG_1984214	I3L0E3	225 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	JAK2	O60674	1132 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	CDKL5	O76039	1030 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	DEXI	O95424	95 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	HMGCR	P04035	888 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	INHA	P05111	366 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	EDNRB	P24530	442 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	MRPL12	P52815	198 aa	Known RBP	11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	AKAP17A	Q02040	695 aa	Known RBP	11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	PWP2	Q15269	919 aa	Known RBP	11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	SLC9C1	Q4G0N8	1177 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	MFSD14C	Q5VZR4	134 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	CCDC83	Q8IWF9	413 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	TRIM22	Q8IYM9	498 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	TNS4	Q8IZW8	715 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	ZNF713	Q8N859	430 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	NSUN6	Q8TEA1	469 aa	Known RBP	11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	SNX21	Q969T3	373 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	ABHD8	Q96I13	439 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	RIC8A	Q9NPQ8	531 aa		11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	ORC3	Q9UBD5	711 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF4-267	ENST00000629343	SYNGAP1	Q96PV0	1343 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	ESYT2	A0FGR8	921 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	ASB14	A6NK59	587 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	EDIL3	O43854	480 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	CLK2	P49760	499 aa	Known RBP	11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	ALDH5A1	P51649	535 aa	Predicted RBP	11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	NPY5R	Q15761	445 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	TAPT1	Q6NXT6	567 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	VSIG10L	Q86VR7	867 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	IWS1	Q96ST2	819 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	RMDN3	Q96TC7	470 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	UNC93B1	Q9H1C4	597 aa		11.39	□□□□□ -0.59
TCF4-267	ENST00000629343	GJB4	Q9NTQ9	266 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms