RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ETNK1Q9HBU6 452 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 CABP5Q9NP86 173 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 PIH1D3Q9NQM4 214 aaKnown RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 FPGT-TNNI3KV9GXZ4 949 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 BDP1A6H8Y1 2624 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 RFX7Q2KHR2 1363 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 PRPF40AO75400 957 aaKnown RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 GLRX3O76003 335 aaKnown RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 EIF1AXP47813 144 aaKnown RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 CERKLQ49MI3 558 aaPredicted RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 INTS6LQ5JSJ4 861 aaKnown RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 FOXP4Q8IVH2 680 aaPredicted RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 SIRT2Q8IXJ6 389 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 SPICE1Q8N0Z3 855 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 STAG2Q8N3U4 1231 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 ANKLE1Q8NAG6 615 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 MTMR10Q9NXD2 777 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 USP3Q9Y6I4 520 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 MUC3AQ02505 3323 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 A0A1W2PPC1 479 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 C19orf81C9J6K1 198 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 EMP3P54852 163 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 CCNA1P78396 465 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 CHD1LQ86WJ1 897 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 GJD3Q8N144 294 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 STK11IPQ8N1F8 1099 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 APBA2Q99767 749 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 IL1RAPL2Q9NP60 686 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 MORF4L1Q9UBU8 362 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 OGDHLQ9ULD0 1010 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 FAM205CA6NFA0 338 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 ABCB5Q2M3G0 1257 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 BMP2KLQ5H9B9 411 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 PRAMEF19Q5SWL8 479 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 CLEC10AQ8IUN9 316 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 SLC43A3Q8NBI5 491 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 CITED4Q96RK1 184 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 DNAJC2Q99543 621 aaKnown RBP5.75□□□□□ -1.49
LINC00550-201ENST00000629293 WDR18Q9BV38 432 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 RPAP3Q9H6T3 665 aaPredicted RBP5.75□□□□□ -1.49
LINC00550-201ENST00000629293 SERPINB13Q9UIV8 391 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 EXOC6BQ9Y2D4 811 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 MAP4K5Q9Y4K4 846 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 PIEZO1Q92508 2521 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 VCAM1P19320 739 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 HOXA7P31268 230 aaPredicted RBP5.75□□□□□ -1.49
LINC00550-201ENST00000629293 SEPT2Q15019 361 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 NCAPG2Q86XI2 1143 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 SCG3Q8WXD2 468 aaKnown RBP5.75□□□□□ -1.49
LINC00550-201ENST00000629293 WNT2BQ93097 391 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 CHMP4CQ96CF2 233 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 PRKD2Q9BZL6 878 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 MCM9Q9NXL9 1143 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 FLRT1Q9NZU1 646 aa5.75□□□□□ -1.49
LINC00550-201ENST00000629293 DBNLQ9UJU6 430 aaKnown RBP5.75□□□□□ -1.49
LINC00550-201ENST00000629293 ISY1Q9ULR0 285 aaKnown RBP5.75□□□□□ -1.49
LINC00550-201ENST00000629293 GDF10P55107 478 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 SKOR1P84550 965 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 AACSQ86V21 672 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 NT5DC4Q86YG4 428 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 SLC44A5Q8NCS7 719 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 PPM1EQ8WY54 764 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 ZNF516Q92618 1163 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 DUSP9Q99956 384 aaKnown RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 C22orf23Q9BZE7 217 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 BTBD7Q9P203 1132 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 DOCK2Q92608 1830 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 PDS5AQ29RF7 1337 aaKnown RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 MGAMO43451 1857 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 LILRA1O75019 489 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 XRCC5P13010 732 aaKnown RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 PLCD1P51178 756 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 MAP3K12Q12852 859 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 MTX1Q13505 466 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 SF3A1Q15459 793 aaKnown RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 LHX8Q68G74 356 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 DPH6Q7L8W6 267 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 SDR42E1Q8WUS8 393 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 KCTD15Q96SI1 283 aaPredicted RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 MTRQ99707 1265 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 RABGAP1Q9Y3P9 1069 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 KBTBD13C9JR72 458 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 FLOT1O75955 427 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 ADORA2AP29274 412 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 RTP1P59025 263 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 ENOX2Q16206 610 aaKnown RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 LRIT3Q3SXY7 679 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 MAP3K21Q5TCX8 1036 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 ZNF697Q5TEC3 545 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 C16orf46Q6P387 395 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 TTC6Q86TZ1 520 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 NPLOC4Q8TAT6 608 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 EAF2Q96CJ1 260 aaPredicted RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 LNPKQ9C0E8 428 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 METTL5Q9NRN9 209 aaKnown RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 DDX20Q9UHI6 824 aaKnown RBP5.74□□□□□ -1.49
LINC00550-201ENST00000629293 STXBP5LQ9Y2K9 1186 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 PTPRFP10586 1907 aa5.74□□□□□ -1.49
LINC00550-201ENST00000629293 BMP8BP34820 402 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms