RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 OPLAHO14841 1288 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 CYBAP13498 195 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 CALML3P27482 149 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 PDIA3P30101 505 aaKnown RBP10.27□□□□□ -0.77
CHD2-216ENST00000629104 CDC27P30260 824 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 GJA8P48165 433 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 RPS6P62753 249 aaKnown RBP10.27□□□□□ -0.77
CHD2-216ENST00000629104 FUT2Q10981 343 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 TRPV1Q8NER1 839 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 PIBF1Q8WXW3 757 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 PURBQ96QR8 312 aaKnown RBP10.27□□□□□ -0.77
CHD2-216ENST00000629104 ALDH8A1Q9H2A2 487 aaPredicted RBP10.27□□□□□ -0.77
CHD2-216ENST00000629104 SEC63Q9UGP8 760 aaKnown RBP10.27□□□□□ -0.77
CHD2-216ENST00000629104 PCDHA1Q9Y5I3 950 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 ASTN1O14525 1302 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 CNTNAP5Q8WYK1 1306 aa10.27□□□□□ -0.77
CHD2-216ENST00000629104 CCDC196A0A1B0GTZ2 297 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 SGPL1O95470 568 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 SNAI1O95863 264 aaPredicted RBP10.26□□□□□ -0.77
CHD2-216ENST00000629104 EN2P19622 333 aaPredicted RBP10.26□□□□□ -0.77
CHD2-216ENST00000629104 ADD1P35611 737 aaKnown RBP10.26□□□□□ -0.77
CHD2-216ENST00000629104 GHRHRQ02643 423 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 MCF2L2Q86YR7 1114 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 U2AF1L4Q8WU68 220 aaKnown RBP10.26□□□□□ -0.77
CHD2-216ENST00000629104 TBC1D5Q92609 795 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 ZNF274Q96GC6 653 aaPredicted RBP10.26□□□□□ -0.77
CHD2-216ENST00000629104 DEFB118Q96PH6 123 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 C22orf23Q9BZE7 217 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 ADD3Q9UEY8 706 aaKnown RBP10.26□□□□□ -0.77
CHD2-216ENST00000629104 NRBP1Q9UHY1 535 aa10.26□□□□□ -0.77
CHD2-216ENST00000629104 hCG_1642624A0A1W2PR95 340 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 ASB14A6NK59 587 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 SEPT4O43236 478 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 CFBP00751 764 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 CNGA1P29973 690 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 RBM25P49756 843 aaKnown RBP10.25□□□□□ -0.77
CHD2-216ENST00000629104 ALDH5A1P51649 535 aaPredicted RBP10.25□□□□□ -0.77
CHD2-216ENST00000629104 HSD17B4P51659 736 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 AK2P54819 239 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 ANKRD1Q15327 319 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 ARMCX2Q7L311 632 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 SAMD3Q8N6K7 520 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 DNERQ8NFT8 737 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 SYTL5Q8TDW5 730 aaPredicted RBP10.25□□□□□ -0.77
CHD2-216ENST00000629104 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
CHD2-216ENST00000629104 CRISPLD2Q9H0B8 497 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.25□□□□□ -0.77
CHD2-216ENST00000629104 MAP3K20Q9NYL2 800 aaKnown RBP10.25□□□□□ -0.77
CHD2-216ENST00000629104 COL20A1Q9P218 1284 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 DDX20Q9UHI6 824 aaKnown RBP10.25□□□□□ -0.77
CHD2-216ENST00000629104 CNPY2Q9Y2B0 182 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 KIAA1217Q5T5P2 1943 aa10.25□□□□□ -0.77
CHD2-216ENST00000629104 LOC102724159A0A0B4J2E5 919 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 MSCO60682 206 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 ZNF865P0CJ78 1059 aaPredicted RBP10.24□□□□□ -0.77
CHD2-216ENST00000629104 CAPN2P17655 700 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 RGS19P49795 217 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 NEK4P51957 841 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 CCT2P78371 535 aaKnown RBP10.24□□□□□ -0.77
CHD2-216ENST00000629104 ACVR2BQ13705 512 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 PWP2Q15269 919 aaKnown RBP10.24□□□□□ -0.77
CHD2-216ENST00000629104 NTRK3Q16288 839 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 LHX8Q68G74 356 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 MORC4Q8TE76 937 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 KIF2CQ99661 725 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 KATNBL1Q9H079 304 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 UPF2Q9HAU5 1272 aaKnown RBP10.24□□□□□ -0.77
CHD2-216ENST00000629104 NCOA5Q9HCD5 579 aaKnown RBP10.24□□□□□ -0.77
CHD2-216ENST00000629104 TPCN1Q9ULQ1 816 aa10.24□□□□□ -0.77
CHD2-216ENST00000629104 DDX49Q9Y6V7 483 aaKnown RBP10.24□□□□□ -0.77
CHD2-216ENST00000629104 V9GY48 417 aaPredicted RBP10.24□□□□□ -0.77
CHD2-216ENST00000629104 GCOM1H8Y6P7 765 aaPredicted RBP10.23□□□□□ -0.77
CHD2-216ENST00000629104 TFRCP02786 760 aaKnown RBP10.23□□□□□ -0.77
CHD2-216ENST00000629104 POLR2MP0CAP2 368 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 AKR1A1P14550 325 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 IFNAR1P17181 557 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 EDNRBP24530 442 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 HOXA13P31271 388 aaPredicted RBP10.23□□□□□ -0.77
CHD2-216ENST00000629104 STK3Q13188 491 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 WWC2Q6AWC2 1192 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 HEATR3Q7Z4Q2 680 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 GPKOWQ92917 476 aaPredicted RBP eCLIP10.23□□□□□ -0.772e-6■□□□□ 11.2
CHD2-216ENST00000629104 TAAR1Q96RJ0 339 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 MPHOSPH6Q99547 160 aaKnown RBP10.23□□□□□ -0.77
CHD2-216ENST00000629104 ZHX1Q9UKY1 873 aaPredicted RBP10.23□□□□□ -0.77
CHD2-216ENST00000629104 OGDHLQ9ULD0 1010 aa10.23□□□□□ -0.77
CHD2-216ENST00000629104 MKI67P46013 3256 aaKnown RBP10.22□□□□□ -0.77
CHD2-216ENST00000629104 hCG_1984214I3L0E3 225 aa10.22□□□□□ -0.77
CHD2-216ENST00000629104 PIK3CDO00329 1044 aa10.22□□□□□ -0.77
CHD2-216ENST00000629104 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
CHD2-216ENST00000629104 PFKFB2O60825 505 aa10.22□□□□□ -0.77
CHD2-216ENST00000629104 SCG2P13521 617 aa10.22□□□□□ -0.77
CHD2-216ENST00000629104 SCRN1Q12765 414 aa10.22□□□□□ -0.77
CHD2-216ENST00000629104 PFKFB3Q16875 520 aaPredicted RBP10.22□□□□□ -0.77
CHD2-216ENST00000629104 ANO1Q5XXA6 986 aa10.22□□□□□ -0.77
CHD2-216ENST00000629104 TYW1BQ6NUM6 668 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms