RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 DSCC1Q9BVC3 393 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 SEMA6BQ9H3T3 888 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 PDGFCQ9NRA1 345 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 DIAPH3Q9NSV4 1193 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 DYNC1LI2O43237 492 aaPredicted RBP14.63□□□□□ -0.07
SOX2-OT-247ENST00000628347 PPIGQ13427 754 aaKnown RBP eCLIP14.63□□□□□ -0.07
SOX2-OT-247ENST00000628347 DUSP28Q4G0W2 176 aa14.63□□□□□ -0.07
SOX2-OT-247ENST00000628347 CWC27Q6UX04 472 aaKnown RBP14.63□□□□□ -0.07
SOX2-OT-247ENST00000628347 PURBQ96QR8 312 aaKnown RBP14.63□□□□□ -0.07
SOX2-OT-247ENST00000628347 DDX49Q9Y6V7 483 aaKnown RBP14.63□□□□□ -0.07
SOX2-OT-247ENST00000628347 CUL9Q8IWT3 2517 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 UNC80Q8N2C7 3258 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 EDNRBP24530 442 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 CXCL17Q6UXB2 119 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 SLC30A10Q6XR72 485 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 RNF207Q6ZRF8 634 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 KIAA1211Q6ZU35 1233 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 EEPD1Q7L9B9 569 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 IQCA1Q86XH1 822 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 TMEM199Q8N511 208 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 RGS22Q8NE09 1264 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 DNERQ8NFT8 737 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 FAM161BQ96MY7 647 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 TTYH1Q9H313 450 aaPredicted RBP14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 GRIN2DO15399 1336 aa14.62□□□□□ -0.07
SOX2-OT-247ENST00000628347 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 PTPDC1A2A3K4 754 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 KDM4AO75164 1064 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 RPS6P62753 249 aaKnown RBP14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 ITGA7Q13683 1181 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 TMEM240Q5SV17 173 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 TMEM63BQ5T3F8 832 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 RASIP1Q5U651 963 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 C16orf59Q7L2K0 433 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 PNMA1Q8ND90 353 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 MPHOSPH6Q99547 160 aaKnown RBP14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 CDX2Q99626 313 aaPredicted RBP14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 ZKSCAN3Q9BRR0 538 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 CTNNA3Q9UI47 895 aa14.61□□□□□ -0.07
SOX2-OT-247ENST00000628347 DLL1O00548 723 aa14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 NKRFO15226 690 aaKnown RBP eCLIP14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 PTGS1P23219 599 aa14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 CALML3P27482 149 aa14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 IMMTQ16891 758 aaKnown RBP14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 ASPRV1Q53RT3 343 aa14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 PSRC1Q6PGN9 363 aaPredicted RBP14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 ZSCAN10Q96SZ4 725 aaPredicted RBP14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 WDR11Q9BZH6 1224 aa14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 KAT14Q9H8E8 782 aa14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 POLR3EQ9NVU0 708 aa14.6□□□□□ -0.07
SOX2-OT-247ENST00000628347 B4DLN1 442 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 B4E1Z4 1266 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 CSF2RAP15509 400 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 CPT1AP50416 773 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 MRPL12P52815 198 aaKnown RBP14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 ENAHQ8N8S7 591 aaPredicted RBP14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 PPP1R12CQ9BZL4 782 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 KRT23Q9C075 422 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 UBA5Q9GZZ9 404 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 CNNM2Q9H8M5 875 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 IL23AQ9NPF7 189 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 ZSWIM5Q9P217 1185 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 ABCB11O95342 1321 aa14.59□□□□□ -0.07
SOX2-OT-247ENST00000628347 SCN10AQ9Y5Y9 1956 aa14.58□□□□□ -0.07
SOX2-OT-247ENST00000628347 GOLGA8HP0CJ92 632 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 DNAJB2P25686 324 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 CYP2C18P33260 490 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 PDE4DQ08499 809 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 SCFD2Q8WU76 684 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 NOC4LQ9BVI4 516 aaKnown RBP14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 HIPK3Q9H422 1215 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 TNKSO95271 1327 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 RAD50Q92878 1312 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 EYSQ5T1H1 3165 aa14.58□□□□□ -0.08
SOX2-OT-247ENST00000628347 B4GALT4O60513 344 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 PDE4AP27815 886 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 PSMC6P62333 389 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 PURAQ00577 322 aaKnown RBP14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 PPP2R5BQ15173 497 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 CDC37Q16543 378 aaPredicted RBP14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 USH1GQ495M9 461 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 ZNF365Q70YC5 407 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 ADGRF4Q8IZF3 695 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 HERVK_113Q902F9 699 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 IL25Q9H293 177 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 ALDH8A1Q9H2A2 487 aaPredicted RBP14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 CPVLQ9H3G5 476 aa14.57□□□□□ -0.08
SOX2-OT-247ENST00000628347 A6NJR5 290 aa14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 KPNA6O60684 536 aa14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 PARP1P09874 1014 aaKnown RBP14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 GSPT1P15170 499 aaKnown RBP14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 QRICH1Q2TAL8 776 aa14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 BRDTQ58F21 947 aaPredicted RBP14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 TTC22Q5TAA0 569 aa14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 MCF2L2Q86YR7 1114 aa14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 MYLIPQ8WY64 445 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms