RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 ZBTB33Q86T24 672 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 TC2NQ8N9U0 490 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 ZNF397Q8NF99 534 aaPredicted RBP9.6□□□□□ -0.87
CHD2-209ENST00000627185 NOC3LQ8WTT2 800 aaKnown RBP9.6□□□□□ -0.87
CHD2-209ENST00000627185 TBC1D22AQ8WUA7 517 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 ERCC4Q92889 916 aaPredicted RBP9.6□□□□□ -0.87
CHD2-209ENST00000627185 IQCDQ96DY2 449 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 UCN2Q96RP3 112 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 ZKSCAN3Q9BRR0 538 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 VPS54Q9P1Q0 977 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 DNAI1Q9UI46 699 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 RWDD2AQ9UIY3 292 aa9.6□□□□□ -0.87
CHD2-209ENST00000627185 FAM205AQ6ZU69 1335 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 TNRC6CQ9HCJ0 1690 aaKnown RBP9.59□□□□□ -0.87
CHD2-209ENST00000627185 UBE2Q2LH0YL09 131 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 H7C1D1 291 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 LDHBP07195 334 aaKnown RBP9.59□□□□□ -0.87
CHD2-209ENST00000627185 H2AFXP16104 143 aaPredicted RBP9.59□□□□□ -0.87
CHD2-209ENST00000627185 TXLNAP40222 546 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 WNT7BP56706 349 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 GRIN1Q05586 938 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 FMR1Q06787 632 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD2-209ENST00000627185 ZNF658Q5TYW1 1059 aaPredicted RBP9.59□□□□□ -0.87
CHD2-209ENST00000627185 CNNM4Q6P4Q7 775 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 C16orf86Q6ZW13 317 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 CNGA4Q8IV77 575 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 BLIDQ8IZY5 108 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 MSL3Q8N5Y2 521 aaKnown RBP9.59□□□□□ -0.87
CHD2-209ENST00000627185 NEDD1Q8NHV4 660 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 DPF2Q92785 391 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 BAG1Q99933 345 aaPredicted RBP9.59□□□□□ -0.87
CHD2-209ENST00000627185 C1QTNF2Q9BXJ5 285 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 ZMYND12Q9H0C1 365 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 BARHL2Q9NY43 387 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 MYO1AQ9UBC5 1043 aa9.59□□□□□ -0.87
CHD2-209ENST00000627185 DDX41Q9UJV9 622 aaKnown RBP9.59□□□□□ -0.87
CHD2-209ENST00000627185 A0A087WWV3 80 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 A0A087X0B3 334 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 A0A1W2PQC6 194 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 TSPY2A6NKD2 308 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 EFCAB8A8MWE9 144 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 TUBBP07437 444 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 PRDX5P30044 214 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 NLRP5P59047 1200 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 FILIP1LQ4L180 1135 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 EARS2Q5JPH6 523 aaKnown RBP9.58□□□□□ -0.88
CHD2-209ENST00000627185 ARHGAP27Q6ZUM4 889 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 DZIP1Q86YF9 867 aaKnown RBP9.58□□□□□ -0.88
CHD2-209ENST00000627185 CRAMP1Q96RY5 1269 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 KAT14Q9H8E8 782 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 IL17RBQ9NRM6 502 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 KBTBD4Q9NVX7 518 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 MAD2L2Q9UI95 211 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 PPP2R2CQ9Y2T4 447 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 PCDHB9Q9Y5E1 797 aa9.58□□□□□ -0.88
CHD2-209ENST00000627185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.58□□□□□ -0.882e-11■■□□□ 13.8
CHD2-209ENST00000627185 ABCB11O95342 1321 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 CCDC88AQ3V6T2 1871 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 DDX60LQ5H9U9 1706 aaKnown RBP9.57□□□□□ -0.88
CHD2-209ENST00000627185 BTAF1O14981 1849 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 AKR1B15C9JRZ8 316 aaPredicted RBP9.57□□□□□ -0.88
CHD2-209ENST00000627185 FOXN1O15353 648 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 RHOBTB3O94955 611 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 CDK11BP21127 795 aaKnown RBP9.57□□□□□ -0.88
CHD2-209ENST00000627185 SKOR1P84550 965 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 AGERQ15109 404 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 TRAPPC3LQ5T215 181 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 USP49Q70CQ1 688 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 RASGRP2Q7LDG7 609 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 KRT25Q7Z3Z0 450 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
CHD2-209ENST00000627185 EPSTI1Q96J88 318 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 MRIQ9BWK5 157 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 RTFDC1Q9BY42 306 aaPredicted RBP9.57□□□□□ -0.88
CHD2-209ENST00000627185 PPP1R12CQ9BZL4 782 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 PLA2G2EQ9NZK7 142 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 CCNL1Q9UK58 526 aaPredicted RBP9.57□□□□□ -0.88
CHD2-209ENST00000627185 ZNF215Q9UL58 517 aaPredicted RBP9.57□□□□□ -0.88
CHD2-209ENST00000627185 CASZ1Q86V15 1759 aa9.57□□□□□ -0.88
CHD2-209ENST00000627185 SYNRGQ9UMZ2 1314 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 VWA3AA6NCI4 1184 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 STXBP3O00186 592 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 SNHG28P0DPA3 235 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 RASA1P20936 1047 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 EEF1GP26641 437 aaKnown RBP9.56□□□□□ -0.88
CHD2-209ENST00000627185 GNA11P29992 359 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 TFAP4Q01664 338 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 GABPB1Q06547 395 aaPredicted RBP9.56□□□□□ -0.88
CHD2-209ENST00000627185 FIGNQ5HY92 759 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 JAKMIP3Q5VZ66 844 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 TMTC1Q8IUR5 882 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 TRMT44Q8IYL2 757 aaKnown RBP9.56□□□□□ -0.88
CHD2-209ENST00000627185 RETREG2Q8NC44 543 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 ANKRD20A12PQ8NF67 263 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 DHX58Q96C10 678 aa9.56□□□□□ -0.88
CHD2-209ENST00000627185 DHTKD1Q96HY7 919 aaPredicted RBP9.56□□□□□ -0.88
CHD2-209ENST00000627185 THAP9Q9H5L6 903 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms