RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 USP5P45974 858 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 FXR1P51114 621 aaKnown RBP eCLIP8.05□□□□□ -1.125e-6■■■□□ 17.1
CTNNA1-244ENST00000627109 ERVK-24P63145 666 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 FIGNQ5HY92 759 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 STYK1Q6J9G0 422 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 TTI2Q6NXR4 508 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 ZNF804AQ7Z570 1209 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 TMTC1Q8IUR5 882 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 KRT222Q8N1A0 295 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 HNRNPLLQ8WVV9 542 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 RABGGTAQ92696 567 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 SGIP1Q9BQI5 828 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 TMEM60Q9H2L4 133 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 SUGT1Q9Y2Z0 365 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 ATP6V0A2Q9Y487 856 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 SOWAHDA6NJG2 315 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 GRIN3BO60391 1043 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 COBLO75128 1261 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 KIF20AO95235 890 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 BAG3O95817 575 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 LDHCP07864 332 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 PPP1R2P41236 205 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 PRCPP42785 496 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 CDK17Q00537 523 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 EHHADHQ08426 723 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 PPFIBP1Q86W92 1011 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 RTKN2Q8IZC4 609 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 MSANTD4Q8NCY6 345 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 MTMR9Q96QG7 549 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 RAB21Q9UL25 225 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 TTF2Q9UNY4 1162 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 CTNND2Q9UQB3 1225 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 LGALS16A8MUM7 142 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 ATP2B4P23634 1241 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 AMPD2Q01433 879 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 KARSQ15046 597 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 DZIP1Q86YF9 867 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 SP8Q8IXZ3 490 aa8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 DHTKD1Q96HY7 919 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-244ENST00000627109 ERICH4A6NGS2 130 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 SLC26A4O43511 780 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 YBX3P16989 372 aaKnown RBP eCLIP8.04□□□□□ -1.124e-8■□□□□ 8.9
CTNNA1-244ENST00000627109 CLK2P49760 499 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 MTF1Q14872 753 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 TEX35Q5T0J7 233 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 PPP1R18Q6NYC8 613 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 KRT25Q7Z3Z0 450 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 NIM1KQ8IY84 436 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 NELFBQ8WX92 580 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 MTMR8Q96EF0 704 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 EYA3Q99504 573 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 MMTAG2Q9BU76 263 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 ZNF287Q9HBT7 754 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 CD209Q9NNX6 404 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 A0A1W2PQJ5 194 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 RASSF10A6NK89 507 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 KCNJ18B7U540 433 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 PLCG2P16885 1265 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 CASQ1P31415 396 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 CASP14P31944 242 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 MCM7P33993 719 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 FXR2P51116 673 aaKnown RBP eCLIP8.04□□□□□ -1.123e-10■■■■■ 41
CTNNA1-244ENST00000627109 GTF2IP78347 998 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 KCNJ12Q14500 433 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 ARHGAP29Q52LW3 1261 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 TMC4Q7Z404 712 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 SMYD4Q8IYR2 804 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 MICAL1Q8TDZ2 1067 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 DYNLL2Q96FJ2 89 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 PURBQ96QR8 312 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 DUSP9Q99956 384 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 CAPN11Q9UMQ6 739 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 PNMA6AP0CW24 399 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 HNRNPH3P31942 346 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 CDK8P49336 464 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 BMS1Q14692 1282 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 FILIP1LQ4L180 1135 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 C9orf131Q5VYM1 1079 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 APBB1IPQ7Z5R6 666 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 ARGLU1Q9NWB6 273 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 POLLQ9UGP5 575 aa8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 REXO2Q9Y3B8 237 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 COL2A1P02458 1487 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-244ENST00000627109 USP17L3A6NCW0 530 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 USP17L4A6NCW7 530 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 KCNA3P22001 575 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 PLA2G4AP47712 749 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 TERF2Q15554 542 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 DTHD1Q6ZMT9 781 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 USP17L1Q7RTZ2 530 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 MB21D1Q8N884 522 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 TBC1D16Q8TBP0 767 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 IQCDQ96DY2 449 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 DESI2Q9BSY9 194 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 KDM4CQ9H3R0 1056 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 MAPK8IP1Q9UQF2 711 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 CLEC11AQ9Y240 323 aa8.03□□□□□ -1.12
CTNNA1-244ENST00000627109 SLX4Q8IY92 1834 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms