RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 CNNM2Q9H8M5 875 aa4.65□□□□□ -1.66
PTP4A1-205ENST00000626021 SEC31BQ9NQW1 1179 aa4.65□□□□□ -1.66
PTP4A1-205ENST00000626021 EMILIN3Q9NT22 766 aa4.65□□□□□ -1.66
PTP4A1-205ENST00000626021 RMND1Q9NWS8 449 aa4.65□□□□□ -1.66
PTP4A1-205ENST00000626021 LUC7L2Q9Y383 392 aaKnown RBP4.65□□□□□ -1.66
PTP4A1-205ENST00000626021 PCDHB6Q9Y5E3 794 aa4.65□□□□□ -1.66
PTP4A1-205ENST00000626021 A0A1W2PQJ5 194 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 KCNJ18B7U540 433 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 TFRCP02786 760 aaKnown RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 MYBL2P10244 700 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 XBP1P17861 261 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 TCP1P17987 556 aaKnown RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 ERCC3P19447 782 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 EEF1GP26641 437 aaKnown RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 DNM2P50570 870 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 VAV2P52735 878 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 STX17P56962 302 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 ACTN3Q08043 901 aaPredicted RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 KCNJ12Q14500 433 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 VPS72Q15906 364 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 DDB1Q16531 1140 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 LRRC24Q50LG9 513 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 PPP4R3AQ6IN85 833 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 SND1Q7KZF4 910 aaKnown RBP eCLIP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 CREG2Q8IUH2 290 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 GRAMD1CQ8IYS0 662 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 ZNF34Q8IZ26 560 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 IQCKQ8N0W5 287 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 CRACR2BQ8N4Y2 399 aaPredicted RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 CEP120Q8N960 986 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 EIF1ADQ8N9N8 165 aaKnown RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 MARCH10Q8NA82 808 aaPredicted RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 TRIM58Q8NG06 486 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 RNF26Q9BY78 433 aaPredicted RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 KRT23Q9C075 422 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 TTYH3Q9C0H2 523 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 VPS16Q9H269 839 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 THAP9Q9H5L6 903 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 VCPKMTQ9H867 229 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 ZNHIT6Q9NWK9 470 aaKnown RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 MCM8Q9UJA3 840 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 ZBTB1Q9Y2K1 713 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 SLC12A7Q9Y666 1083 aa4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 COL11A2P13942 1736 aaPredicted RBP4.65□□□□□ -1.67
PTP4A1-205ENST00000626021 PDS5AQ29RF7 1337 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 SPATA31A6Q5VVP1 1343 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 CNTNAP4Q9C0A0 1308 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 A0A087X0B3 334 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 TTC26A0AVF1 554 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 TRIM75PA6NK02 468 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 LGALS16A8MUM7 142 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 B4E1Z4 1266 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 PATL2C9JE40 543 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 PDE2AO00408 941 aaPredicted RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 DPYSL4O14531 572 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 NDUFAB1O14561 156 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 PJA2O43164 708 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 USO1O60763 962 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 TOM1O60784 492 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 TACC1O75410 805 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 LCA5LO95447 670 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 MYL1P05976 194 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 PARP1P09874 1014 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 SRGNP10124 158 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 HNRNPH3P31942 346 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 RDXP35241 583 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 PPP1R2P41236 205 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 ZAP70P43403 619 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 MRPL12P52815 198 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 NAP1L1P55209 391 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 CTSWP56202 376 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 ZBED6P86452 979 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 SATB1Q01826 763 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 FKBP4Q02790 459 aaKnown RBP eCLIP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 UBXN1Q04323 297 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 IFFO1Q0D2I5 559 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 KCNB1Q14721 858 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 RTN1Q16799 776 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 TTMPQ5BVD1 217 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 TMEM67Q5HYA8 995 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 RRAGBQ5VZM2 374 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 KLHL10Q6JEL2 608 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 INTS5Q6P9B9 1019 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 TMED8Q6PL24 325 aaPredicted RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 NFXL1Q6ZNB6 911 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 USP49Q70CQ1 688 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 KIAA1328Q86T90 577 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 MICU3Q86XE3 530 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 RAB11FIP4Q86YS3 637 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 TBC1D10CQ8IV04 446 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 ARFGAP2Q8N6H7 521 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 VGLL2Q8N8G2 317 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 GIMAP7Q8NHV1 300 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 P3H4Q92791 437 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 ZKSCAN4Q969J2 545 aaPredicted RBP4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 MIEF2Q96C03 454 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 RUFY1Q96T51 708 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 VEZTQ9HBM0 779 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 GDF3Q9NR23 364 aa4.64□□□□□ -1.67
PTP4A1-205ENST00000626021 KLC4Q9NSK0 619 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms