RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 DEFB118Q96PH6 123 aa16.79■□□□□ 0.28
SOX2-OT-237ENST00000625581 CRISPLD2Q9H0B8 497 aa16.79■□□□□ 0.28
SOX2-OT-237ENST00000625581 MRPL11Q9Y3B7 192 aaKnown RBP16.79■□□□□ 0.28
SOX2-OT-237ENST00000625581 PCDHA1Q9Y5I3 950 aa16.79■□□□□ 0.28
SOX2-OT-237ENST00000625581 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
SOX2-OT-237ENST00000625581 hCG_1642624A0A1W2PR95 340 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 CALML3P27482 149 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 PDIA3P30101 505 aaKnown RBP16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 RGS19P49795 217 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 LHX8Q68G74 356 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 ARMCX2Q7L311 632 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 MAF1Q9H063 256 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 KATNBL1Q9H079 304 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 COL20A1Q9P218 1284 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 NRBP1Q9UHY1 535 aa16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
SOX2-OT-237ENST00000625581 KIAA1217Q5T5P2 1943 aa16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 SGPL1O95470 568 aa16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 ZNF865P0CJ78 1059 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 ADD1P35611 737 aaKnown RBP16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 ALDH5A1P51649 535 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 HSD17B4P51659 736 aa16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 MORC4Q8TE76 937 aa16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 KIF2CQ99661 725 aa16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 LARP6Q9BRS8 491 aaKnown RBP16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 ALDH8A1Q9H2A2 487 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 SEC63Q9UGP8 760 aaKnown RBP16.77■□□□□ 0.28
SOX2-OT-237ENST00000625581 SEPT4O43236 478 aa16.76■□□□□ 0.27
SOX2-OT-237ENST00000625581 PPP2R5BQ15173 497 aa16.76■□□□□ 0.27
SOX2-OT-237ENST00000625581 NTRK3Q16288 839 aa16.76■□□□□ 0.27
SOX2-OT-237ENST00000625581 MCF2L2Q86YR7 1114 aa16.76■□□□□ 0.27
SOX2-OT-237ENST00000625581 SYTL5Q8TDW5 730 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-237ENST00000625581 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
SOX2-OT-237ENST00000625581 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
SOX2-OT-237ENST00000625581 ALPK3Q96L96 1907 aa16.76■□□□□ 0.27
SOX2-OT-237ENST00000625581 EDNRBP24530 442 aa16.75■□□□□ 0.27
SOX2-OT-237ENST00000625581 RBM25P49756 843 aaKnown RBP16.75■□□□□ 0.27
SOX2-OT-237ENST00000625581 MNX1P50219 401 aaPredicted RBP16.75■□□□□ 0.27
SOX2-OT-237ENST00000625581 AK2P54819 239 aa16.75■□□□□ 0.27
SOX2-OT-237ENST00000625581 TRAF1Q13077 416 aa16.75■□□□□ 0.27
SOX2-OT-237ENST00000625581 UBE2Q1Q7Z7E8 422 aa16.75■□□□□ 0.27
SOX2-OT-237ENST00000625581 ZNF274Q96GC6 653 aaPredicted RBP16.75■□□□□ 0.27
SOX2-OT-237ENST00000625581 OGDHLQ9ULD0 1010 aa16.75■□□□□ 0.27
SOX2-OT-237ENST00000625581 LOC102724159A0A0B4J2E5 919 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 CCDC196A0A1B0GTZ2 297 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 ASB14A6NK59 587 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 ADCY6O43306 1168 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 CFBP00751 764 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 CNGA1P29973 690 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 CCT2P78371 535 aaKnown RBP16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 ACVR2BQ13705 512 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 PWP2Q15269 919 aaKnown RBP16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 WWC2Q6AWC2 1192 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 TYW1BQ6NUM6 668 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 DNERQ8NFT8 737 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 GPKOWQ92917 476 aaPredicted RBP eCLIP16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 LENG1Q96BZ8 264 aaPredicted RBP16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 C22orf23Q9BZE7 217 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 ADD3Q9UEY8 706 aaKnown RBP16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 TPCN1Q9ULQ1 816 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 CNPY2Q9Y2B0 182 aa16.74■□□□□ 0.27
SOX2-OT-237ENST00000625581 MSCO60682 206 aa16.73■□□□□ 0.27
SOX2-OT-237ENST00000625581 HOXA13P31271 388 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-237ENST00000625581 ANO1Q5XXA6 986 aa16.73■□□□□ 0.27
SOX2-OT-237ENST00000625581 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
SOX2-OT-237ENST00000625581 SAMD3Q8N6K7 520 aa16.73■□□□□ 0.27
SOX2-OT-237ENST00000625581 TAAR1Q96RJ0 339 aa16.73■□□□□ 0.27
SOX2-OT-237ENST00000625581 ABHD16BQ9H3Z7 469 aa16.73■□□□□ 0.27
SOX2-OT-237ENST00000625581 V9GY48 417 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-237ENST00000625581 STXBP3O00186 592 aa16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 LARGE1O95461 756 aa16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 TFRCP02786 760 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 AKR1A1P14550 325 aa16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 IFNAR1P17181 557 aa16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 NEK4P51957 841 aa16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 PKN1Q16512 942 aa16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 FBXO16Q8IX29 292 aaPredicted RBP16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 PHKBQ93100 1093 aa16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 MAP3K20Q9NYL2 800 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-237ENST00000625581 FRMPD4Q14CM0 1322 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 GCOM1H8Y6P7 765 aaPredicted RBP16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 MEIS2O14770 477 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 FARP2O94887 1054 aaPredicted RBP16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 POLR2MP0CAP2 368 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 CAPN2P17655 700 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 SCRN1Q12765 414 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 STK3Q13188 491 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 PFKFB3Q16875 520 aaPredicted RBP16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 CCDC144BQ3MJ40 725 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 TAPT1Q6NXT6 567 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 ANKLE1Q8NAG6 615 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 DIS3LQ8TF46 1054 aaKnown RBP16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 RMDN3Q96TC7 470 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 VTA1Q9NP79 307 aa16.71■□□□□ 0.27
SOX2-OT-237ENST00000625581 PXMP2Q9NR77 195 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms