RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 MMTAG2Q9BU76 263 aaKnown RBP12.58□□□□□ -0.39
VARS2-213ENST00000625423 VPS18Q9P253 973 aa12.58□□□□□ -0.39
VARS2-213ENST00000625423 RTCBQ9Y3I0 505 aaKnown RBP12.58□□□□□ -0.39
VARS2-213ENST00000625423 SAR1BQ9Y6B6 198 aa12.58□□□□□ -0.39
VARS2-213ENST00000625423 KRT86O43790 486 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 LDHCP07864 332 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 GNA11P29992 359 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 ZBED6P86452 979 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 GRAPQ13588 217 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 MIIPQ5JXC2 388 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
VARS2-213ENST00000625423 PIGSQ96S52 555 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 NUP58Q9BVL2 599 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 GBP3Q9H0R5 595 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 DUSP10Q9Y6W6 482 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
VARS2-213ENST00000625423 LMAN1P49257 510 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 CYP27A1Q02318 531 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 FAM114A1Q8IWE2 563 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 UBA5Q9GZZ9 404 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 ZNF287Q9HBT7 754 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 SLC39A2Q9NP94 309 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 TMEM260Q9NX78 707 aa12.58□□□□□ -0.4
VARS2-213ENST00000625423 SEC63Q9UGP8 760 aaKnown RBP12.58□□□□□ -0.4
VARS2-213ENST00000625423 TXKP42681 527 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 PAPD7Q5XG87 772 aaKnown RBP12.57□□□□□ -0.4
VARS2-213ENST00000625423 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 RETREG2Q8NC44 543 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 KIAA0895Q8NCT3 520 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 EXOC4Q96A65 974 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 ZBTB22O15209 634 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 IPO7O95373 1038 aaKnown RBP12.57□□□□□ -0.4
VARS2-213ENST00000625423 AMPD3Q01432 767 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 WDR93Q6P2C0 686 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 TEX11Q8IYF3 940 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 NEDD1Q8NHV4 660 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 CEP95Q96GE4 821 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 SEMA6BQ9H3T3 888 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 SNED1Q8TER0 1413 aa12.57□□□□□ -0.4
VARS2-213ENST00000625423 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
VARS2-213ENST00000625423 EIF3CLB5ME19 914 aaKnown RBP12.56□□□□□ -0.4
VARS2-213ENST00000625423 TUBBP07437 444 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 CCDC170Q8IYT3 715 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 EIF3CQ99613 913 aaKnown RBP12.56□□□□□ -0.4
VARS2-213ENST00000625423 CCNL1Q9UK58 526 aaPredicted RBP12.56□□□□□ -0.4
VARS2-213ENST00000625423 MACROD2A1Z1Q3 448 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 USP17L5A8MUK1 530 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 HSPA1LP34931 641 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 USP14P54578 494 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 CNNM4Q6P4Q7 775 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 ZNF662Q6ZS27 426 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 CCDC102AQ96A19 550 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 FAN1Q9Y2M0 1017 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 ZSCAN29Q8IWY8 852 aaPredicted RBP12.56□□□□□ -0.4
VARS2-213ENST00000625423 REXO1Q8N1G1 1221 aaKnown RBP12.56□□□□□ -0.4
VARS2-213ENST00000625423 MSL3Q8N5Y2 521 aaKnown RBP12.56□□□□□ -0.4
VARS2-213ENST00000625423 ERGIC2Q96RQ1 377 aa12.56□□□□□ -0.4
VARS2-213ENST00000625423 ZNF185O15231 689 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 PLEKP08567 350 aaPredicted RBP12.55□□□□□ -0.4
VARS2-213ENST00000625423 GRB10Q13322 594 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 FKBP15Q5T1M5 1219 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 DYMQ7RTS9 669 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 KRT26Q7Z3Y9 468 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 PSD3Q9NYI0 1048 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 MYMKA6NI61 221 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 PHACTR2O75167 634 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 PPP1R2P41236 205 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 GPSM2P81274 684 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 CCDC42Q96M95 316 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 BLOC1S4Q9NUP1 217 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 LRWD1Q9UFC0 647 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
VARS2-213ENST00000625423 GPR75-ASB3A0A0A6YYF3 556 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 ZNF263O14978 683 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 ZSCAN26Q16670 478 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 CENPPQ6IPU0 288 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 COA7Q96BR5 231 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 COL24A1Q17RW2 1714 aa12.55□□□□□ -0.4
VARS2-213ENST00000625423 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 EPHB6O15197 1021 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 IDEP14735 1019 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 RFC4P35249 363 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 KIF5AQ12840 1032 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 CALCRLQ16602 461 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 FIGNQ5HY92 759 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 CAGE1Q8TC20 777 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 JADE2Q9NQC1 790 aa12.54□□□□□ -0.4
VARS2-213ENST00000625423 FAM207AQ9NSI2 230 aaPredicted RBP12.54□□□□□ -0.4
VARS2-213ENST00000625423 TNRC6CQ9HCJ0 1690 aaKnown RBP12.54□□□□□ -0.4
VARS2-213ENST00000625423 A0A1W2PQJ5 194 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms