RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
LINC00552-201ENST00000625151 DUSP10Q9Y6W6 482 aa17■□□□□ 0.31
LINC00552-201ENST00000625151 KRT86O43790 486 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 OR52Z1P0C646 297 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 CYLC1P35663 651 aaPredicted RBP16.99■□□□□ 0.31
LINC00552-201ENST00000625151 ASIC1P78348 528 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 GRIK5Q16478 980 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 LETM2Q2VYF4 491 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 GOLGA5Q8TBA6 731 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 COL24A1Q17RW2 1714 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
LINC00552-201ENST00000625151 ZBED6P86452 979 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 SEMA3FQ13275 785 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 SPTY2D1Q68D10 685 aaPredicted RBP16.99■□□□□ 0.31
LINC00552-201ENST00000625151 NBPF5PQ86XG9 351 aaPredicted RBP16.99■□□□□ 0.31
LINC00552-201ENST00000625151 HPS3Q969F9 1004 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 CUEDC2Q9H467 287 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 NARFQ9UHQ1 456 aa16.99■□□□□ 0.31
LINC00552-201ENST00000625151 EIF3CLB5ME19 914 aaKnown RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 LDHBP07195 334 aaKnown RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 ACTN2P35609 894 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 MTIF2P46199 727 aaKnown RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 PAXIP1Q6ZW49 1069 aaPredicted RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 FAM71BQ8TC56 605 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 TGFBRAP1Q8WUH2 860 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 AK8Q96MA6 479 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 EIF3CQ99613 913 aaKnown RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 NUP58Q9BVL2 599 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 ZMYND12Q9H0C1 365 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 MAGEF1Q9HAY2 307 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 ZNHIT6Q9NWK9 470 aaKnown RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 MYH10P35580 1976 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 BICDL2A1A5D9 508 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 KLRF2D3W0D1 207 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 ZNF185O15231 689 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 NAPAP54920 295 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 TMED8Q6PL24 325 aaPredicted RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 ZNF444Q8N0Y2 327 aaPredicted RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 RETREG2Q8NC44 543 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 EHBP1Q8NDI1 1231 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 PCMTD1Q96MG8 357 aaPredicted RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 C7orf25Q9BPX7 421 aa16.98■□□□□ 0.31
LINC00552-201ENST00000625151 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 SAP30BPQ9UHR5 308 aaKnown RBP16.98■□□□□ 0.31
LINC00552-201ENST00000625151 RASA1P20936 1047 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 HSP90B2PQ58FF3 399 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 CCDC170Q8IYT3 715 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 KIAA0895Q8NCT3 520 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 MMTAG2Q9BU76 263 aaKnown RBP16.97■□□□□ 0.31
LINC00552-201ENST00000625151 NYXQ9GZU5 481 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 MACROD2A1Z1Q3 448 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 PDE2AO00408 941 aaPredicted RBP16.97■□□□□ 0.31
LINC00552-201ENST00000625151 ZNF263O14978 683 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 TM4SF1P30408 202 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 TECP42680 631 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 NONOQ15233 471 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC00552-201ENST00000625151 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
LINC00552-201ENST00000625151 ZSCAN29Q8IWY8 852 aaPredicted RBP16.97■□□□□ 0.31
LINC00552-201ENST00000625151 PURBQ96QR8 312 aaKnown RBP16.97■□□□□ 0.31
LINC00552-201ENST00000625151 ZMYND10O75800 440 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 PLEKP08567 350 aaPredicted RBP16.96■□□□□ 0.31
LINC00552-201ENST00000625151 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 FAM114A1Q8IWE2 563 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 CCDC47Q96A33 483 aaKnown RBP16.96■□□□□ 0.31
LINC00552-201ENST00000625151 TNRC6CQ9HCJ0 1690 aaKnown RBP16.96■□□□□ 0.31
LINC00552-201ENST00000625151 DDX60LQ5H9U9 1706 aaKnown RBP16.96■□□□□ 0.31
LINC00552-201ENST00000625151 SMCO2A6NFE2 343 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 IPO7O95373 1038 aaKnown RBP16.96■□□□□ 0.31
LINC00552-201ENST00000625151 NT5C2P49902 561 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 ERGIC2Q96RQ1 377 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 SPZ1Q9BXG8 430 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 SEMA6BQ9H3T3 888 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 MED4Q9NPJ6 270 aa16.96■□□□□ 0.31
LINC00552-201ENST00000625151 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.95■□□□□ 0.3
LINC00552-201ENST00000625151 ZPR1O75312 459 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 APBA3O96018 575 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 TNNT3P45378 269 aaPredicted RBP16.95■□□□□ 0.3
LINC00552-201ENST00000625151 CKAP4Q07065 602 aaKnown RBP16.95■□□□□ 0.3
LINC00552-201ENST00000625151 NEK8Q86SG6 692 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 AMOTL1Q8IY63 956 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 ACBD3Q9H3P7 528 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 VIPAS39Q9H9C1 493 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 SLC39A2Q9NP94 309 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 TARSL2A2RTX5 802 aaKnown RBP16.95■□□□□ 0.3
LINC00552-201ENST00000625151 SYF2O95926 243 aaKnown RBP16.95■□□□□ 0.3
LINC00552-201ENST00000625151 IDEP14735 1019 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 VAV2P52735 878 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 FIGNQ5HY92 759 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 USP17L2Q6R6M4 530 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 GSPT2Q8IYD1 628 aaKnown RBP16.95■□□□□ 0.3
LINC00552-201ENST00000625151 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
LINC00552-201ENST00000625151 RPGRIP1Q96KN7 1286 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 GDAP1L1Q96MZ0 367 aa16.95■□□□□ 0.3
LINC00552-201ENST00000625151 LZTS2Q9BRK4 669 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms