RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 RAD21O60216 631 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 AKAP17AQ02040 695 aaKnown RBP19.84■□□□□ 0.77
PCF11-207ENST00000624931 NR1I3Q14994 352 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 PDILTQ8N807 584 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 CEP112Q8N8E3 955 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 CCDC51Q96ER9 411 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 CLIC6Q96NY7 704 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 GPCPD1Q9NPB8 672 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 INTS13Q9NVM9 706 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 FZD1Q9UP38 647 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 SRPRBQ9Y5M8 271 aaKnown RBP19.84■□□□□ 0.77
PCF11-207ENST00000624931 CCDC151A5D8V7 595 aa19.83■□□□□ 0.77
PCF11-207ENST00000624931 AKR1B15C9JRZ8 316 aaPredicted RBP19.83■□□□□ 0.77
PCF11-207ENST00000624931 TBC1D12O60347 775 aa19.83■□□□□ 0.77
PCF11-207ENST00000624931 UBA5Q9GZZ9 404 aa19.83■□□□□ 0.77
PCF11-207ENST00000624931 CABP5Q9NP86 173 aa19.83■□□□□ 0.77
PCF11-207ENST00000624931 PSD3Q9NYI0 1048 aa19.83■□□□□ 0.77
PCF11-207ENST00000624931 NYAP2Q9P242 653 aa19.83■□□□□ 0.77
PCF11-207ENST00000624931 FBXO2Q9UK22 296 aaPredicted RBP19.83■□□□□ 0.77
PCF11-207ENST00000624931 POLR2AP24928 1970 aaKnown RBP19.83■□□□□ 0.76
PCF11-207ENST00000624931 A0A1W2PRG0 241 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 BMP15O95972 392 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 SNHG28P0DPA3 235 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 TXLNAP40222 546 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 CCDC96Q2M329 555 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 APOBEC3FQ8IUX4 373 aaKnown RBP19.82■□□□□ 0.76
PCF11-207ENST00000624931 SPATA20Q8TB22 786 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 HNRNPLLQ8WVV9 542 aaKnown RBP19.82■□□□□ 0.76
PCF11-207ENST00000624931 KIFC2Q96AC6 838 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 ADARB2Q9NS39 739 aaKnown RBP19.82■□□□□ 0.76
PCF11-207ENST00000624931 SSC5DA1L4H1 1573 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 A0A1B0GTH6 734 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 PHF20L1A8MW92 1017 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 MAP3K10Q02779 954 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 MUM1L1Q5H9M0 696 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 TTBK2Q6IQ55 1244 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 KCTD1Q719H9 257 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 ACER1Q8TDN7 264 aa19.82■□□□□ 0.76
PCF11-207ENST00000624931 GPKOWQ92917 476 aaPredicted RBP eCLIP19.82■□□□□ 0.76
PCF11-207ENST00000624931 TBC1D8O95759 1140 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 BMP6P22004 513 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 CAP2P40123 477 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 ECE1P42892 770 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 GNAQP50148 359 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 ZNF543Q08ER8 600 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 FILIP1LQ4L180 1135 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 PPFIBP1Q86W92 1011 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 NUP88Q99567 741 aaPredicted RBP19.81■□□□□ 0.76
PCF11-207ENST00000624931 VAT1LQ9HCJ6 419 aa19.81■□□□□ 0.76
PCF11-207ENST00000624931 GRIN3BO60391 1043 aa19.8■□□□□ 0.76
PCF11-207ENST00000624931 SCG2P13521 617 aa19.8■□□□□ 0.76
PCF11-207ENST00000624931 SLC20A2Q08357 652 aa19.8■□□□□ 0.76
PCF11-207ENST00000624931 SMC1AQ14683 1233 aaKnown RBP19.8■□□□□ 0.76
PCF11-207ENST00000624931 SPATA1Q5VX52 437 aa19.8■□□□□ 0.76
PCF11-207ENST00000624931 DIS3L2Q8IYB7 885 aaKnown RBP19.8■□□□□ 0.76
PCF11-207ENST00000624931 OXER1Q8TDS5 423 aa19.8■□□□□ 0.76
PCF11-207ENST00000624931 MKL1Q969V6 931 aa19.8■□□□□ 0.76
PCF11-207ENST00000624931 GLIS2Q9BZE0 524 aaPredicted RBP19.8■□□□□ 0.76
PCF11-207ENST00000624931 ST7Q9NRC1 585 aa19.8■□□□□ 0.76
PCF11-207ENST00000624931 TULP2O00295 520 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 ADAMTS3O15072 1205 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 KIF5CO60282 957 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 SLC16A2P36021 539 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 PFKFB3Q16875 520 aaPredicted RBP19.79■□□□□ 0.76
PCF11-207ENST00000624931 ASPRV1Q53RT3 343 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 SLFN13Q68D06 897 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 SRGAP1Q7Z6B7 1085 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 WDR24Q96S15 920 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 PARD6BQ9BYG5 372 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 SERTAD1Q9UHV2 236 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 ADM5C9JUS6 153 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 FANCGO15287 622 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 POLR2DO15514 142 aaKnown RBP19.79■□□□□ 0.76
PCF11-207ENST00000624931 ERLIN1O75477 346 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 XBP1P17861 261 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 INPP5BP32019 993 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 KIAA1755Q5JYT7 1200 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 EXOC4Q96A65 974 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 L3MBTL3Q96JM7 780 aaPredicted RBP19.79■□□□□ 0.76
PCF11-207ENST00000624931 PYM1Q9BRP8 204 aaKnown RBP19.79■□□□□ 0.76
PCF11-207ENST00000624931 SPZ1Q9BXG8 430 aa19.79■□□□□ 0.76
PCF11-207ENST00000624931 CWC15Q9P013 229 aaKnown RBP19.79■□□□□ 0.76
PCF11-207ENST00000624931 ITIH6Q6UXX5 1313 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 ERICH4A6NGS2 130 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 BTBD18B2RXH4 712 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 NDUFB10O96000 172 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 OAS2P29728 719 aaKnown RBP19.78■□□□□ 0.76
PCF11-207ENST00000624931 NR5A1Q13285 461 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 WWC2Q6AWC2 1192 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 TYW1BQ6NUM6 668 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 DPY19L2Q6NUT2 758 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 PIGSQ96S52 555 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 LZTS2Q9BRK4 669 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 GBP3Q9H0R5 595 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 MYO1AQ9UBC5 1043 aa19.78■□□□□ 0.76
PCF11-207ENST00000624931 F5H6K3 240 aa19.77■□□□□ 0.76
PCF11-207ENST00000624931 ACTN4O43707 911 aaKnown RBP19.77■□□□□ 0.76
PCF11-207ENST00000624931 TOB1P50616 345 aaPredicted RBP19.77■□□□□ 0.76
PCF11-207ENST00000624931 FMR1Q06787 632 aaKnown RBP eCLIP19.77■□□□□ 0.76
PCF11-207ENST00000624931 KLRC3Q07444 240 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms